Miyakogusa Predicted Gene

Lj0g3v0104549.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104549.1 Non Chatacterized Hit- tr|H9WEJ2|H9WEJ2_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=C,62.38,3e-19,coiled-coil,NULL; seg,NULL,CUFF.5938.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g47280.1                                                       256   7e-69
Glyma06g47280.3                                                       207   2e-54
Glyma06g47280.2                                                       204   4e-53
Glyma04g16010.1                                                       194   3e-50

>Glyma06g47280.1 
          Length = 216

 Score =  256 bits (654), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 124/150 (82%), Positives = 131/150 (87%)

Query: 1   MTSGGELAYQQLCSGITTEFNDCSKKVLEMESLFRSPDYCRVDLAQILRAVQDQEKQKLH 60
           M SGGELAY+QLCS IT EFN+CSKKVLEMESLFRSPDYCRVDLAQ+LRAVQDQEKQKL 
Sbjct: 67  MASGGELAYKQLCSEITIEFNNCSKKVLEMESLFRSPDYCRVDLAQLLRAVQDQEKQKLQ 126

Query: 61  LTATIQLLKKAGRPSERLVSHENCKYTKPSEHVCANVQEITEASGTXXXXXXXXXXXXLK 120
           LTATIQ+LKKAGRPSERLVSHENCK+TKP+EH C +VQEITEASGT            LK
Sbjct: 127 LTATIQVLKKAGRPSERLVSHENCKFTKPAEHECVHVQEITEASGTEEAEADAEYDNALK 186

Query: 121 EAIRGVQDAVMAINEHLEEVRYEIAALEVE 150
           EAIRGVQDAVMAINEHLEEVRYEIAALE E
Sbjct: 187 EAIRGVQDAVMAINEHLEEVRYEIAALEAE 216


>Glyma06g47280.3 
          Length = 148

 Score =  207 bits (528), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/125 (82%), Positives = 109/125 (87%)

Query: 26  KVLEMESLFRSPDYCRVDLAQILRAVQDQEKQKLHLTATIQLLKKAGRPSERLVSHENCK 85
           +VLEMESLFRSPDYCRVDLAQ+LRAVQDQEKQKL LTATIQ+LKKAGRPSERLVSHENCK
Sbjct: 24  QVLEMESLFRSPDYCRVDLAQLLRAVQDQEKQKLQLTATIQVLKKAGRPSERLVSHENCK 83

Query: 86  YTKPSEHVCANVQEITEASGTXXXXXXXXXXXXLKEAIRGVQDAVMAINEHLEEVRYEIA 145
           +TKP+EH C +VQEITEASGT            LKEAIRGVQDAVMAINEHLEEVRYEIA
Sbjct: 84  FTKPAEHECVHVQEITEASGTEEAEADAEYDNALKEAIRGVQDAVMAINEHLEEVRYEIA 143

Query: 146 ALEVE 150
           ALE E
Sbjct: 144 ALEAE 148


>Glyma06g47280.2 
          Length = 121

 Score =  204 bits (518), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 100/121 (82%), Positives = 105/121 (86%)

Query: 30  MESLFRSPDYCRVDLAQILRAVQDQEKQKLHLTATIQLLKKAGRPSERLVSHENCKYTKP 89
           MESLFRSPDYCRVDLAQ+LRAVQDQEKQKL LTATIQ+LKKAGRPSERLVSHENCK+TKP
Sbjct: 1   MESLFRSPDYCRVDLAQLLRAVQDQEKQKLQLTATIQVLKKAGRPSERLVSHENCKFTKP 60

Query: 90  SEHVCANVQEITEASGTXXXXXXXXXXXXLKEAIRGVQDAVMAINEHLEEVRYEIAALEV 149
           +EH C +VQEITEASGT            LKEAIRGVQDAVMAINEHLEEVRYEIAALE 
Sbjct: 61  AEHECVHVQEITEASGTEEAEADAEYDNALKEAIRGVQDAVMAINEHLEEVRYEIAALEA 120

Query: 150 E 150
           E
Sbjct: 121 E 121


>Glyma04g16010.1 
          Length = 121

 Score =  194 bits (492), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 95/121 (78%), Positives = 102/121 (84%)

Query: 30  MESLFRSPDYCRVDLAQILRAVQDQEKQKLHLTATIQLLKKAGRPSERLVSHENCKYTKP 89
           MESLF SPDYCRVDLAQ+LRA+QDQEK KL LTATIQ+LKKAGRPSERLVSHENCK+TKP
Sbjct: 1   MESLFTSPDYCRVDLAQLLRAIQDQEKLKLQLTATIQVLKKAGRPSERLVSHENCKFTKP 60

Query: 90  SEHVCANVQEITEASGTXXXXXXXXXXXXLKEAIRGVQDAVMAINEHLEEVRYEIAALEV 149
           +EH C +VQEITEASGT            LKEAIRGVQDAVMAINE +EEVRYEIAALE 
Sbjct: 61  AEHECVHVQEITEASGTEEAEADAEYDNALKEAIRGVQDAVMAINERMEEVRYEIAALEA 120

Query: 150 E 150
           E
Sbjct: 121 E 121