Miyakogusa Predicted Gene

Lj0g3v0104349.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104349.1 Non Chatacterized Hit- tr|G7PY20|G7PY20_MACFA
Putative uncharacterized protein OS=Macaca fasciculari,60,2e-19,WD40
repeat-like,WD40-repeat-containing domain; WD40,WD40 repeat; no
description,WD40/YVTN repeat-li,CUFF.5924.1
         (101 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g28040.2                                                       142   9e-35
Glyma05g28040.1                                                       142   9e-35
Glyma08g11020.1                                                       140   4e-34
Glyma11g09700.1                                                        50   8e-07
Glyma12g03700.1                                                        47   4e-06

>Glyma05g28040.2 
          Length = 470

 Score =  142 bits (358), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 77/102 (75%), Gaps = 2/102 (1%)

Query: 1   MSSHLNSLXXXXXXXXXXXXXX-XQVPLQKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIY 59
           ++SHLN+L                Q PL KFKHKDEGYAIDWSP+VPGRL SGDCNNCIY
Sbjct: 190 LNSHLNALAESETEGVQGVAAVFNQDPLYKFKHKDEGYAIDWSPLVPGRLASGDCNNCIY 249

Query: 60  LWEPNSAAATWSVDNAPFIGHTASVEDLQWSPKDHDIFASCS 101
           LWEP S A TW+VDNAPF GHTASVEDLQWSP + D+FASCS
Sbjct: 250 LWEPTS-AGTWNVDNAPFTGHTASVEDLQWSPTEPDVFASCS 290


>Glyma05g28040.1 
          Length = 473

 Score =  142 bits (358), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 70/102 (68%), Positives = 77/102 (75%), Gaps = 2/102 (1%)

Query: 1   MSSHLNSLXXXXXXXXXXXXXX-XQVPLQKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIY 59
           ++SHLN+L                Q PL KFKHKDEGYAIDWSP+VPGRL SGDCNNCIY
Sbjct: 193 LNSHLNALAESETEGVQGVAAVFNQDPLYKFKHKDEGYAIDWSPLVPGRLASGDCNNCIY 252

Query: 60  LWEPNSAAATWSVDNAPFIGHTASVEDLQWSPKDHDIFASCS 101
           LWEP S A TW+VDNAPF GHTASVEDLQWSP + D+FASCS
Sbjct: 253 LWEPTS-AGTWNVDNAPFTGHTASVEDLQWSPTEPDVFASCS 293


>Glyma08g11020.1 
          Length = 458

 Score =  140 bits (352), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 69/102 (67%), Positives = 76/102 (74%), Gaps = 2/102 (1%)

Query: 1   MSSHLNSLXXXXXXXXXXXXXX-XQVPLQKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIY 59
           ++SHLN L                Q PL KFKHKDEGYAIDWSP+VPG+L SGDCNNCIY
Sbjct: 178 LNSHLNVLAETETEGVQGVAAVFNQDPLYKFKHKDEGYAIDWSPLVPGKLASGDCNNCIY 237

Query: 60  LWEPNSAAATWSVDNAPFIGHTASVEDLQWSPKDHDIFASCS 101
           LWEP S A TW+VDNAPFIGHTASVEDLQWSP +  +FASCS
Sbjct: 238 LWEPTS-AGTWNVDNAPFIGHTASVEDLQWSPTESHVFASCS 278


>Glyma11g09700.1 
          Length = 403

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 27  LQKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPNSAAATWSVDNAPFI--GHTASV 84
           L+   H  EGY + WSP   G L+SG  ++ + LW+  +AA+   V +A  +  GH   V
Sbjct: 155 LRLRGHDKEGYGLSWSPFKNGYLLSGSHDHKVCLWDVPAAASQDKVLDAFHVYEGHENVV 214

Query: 85  EDLQWSPKDHDIFAS 99
           ED+ W+ KD ++F S
Sbjct: 215 EDVSWNLKDENMFGS 229


>Glyma12g03700.1 
          Length = 401

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)

Query: 27  LQKFKHKDEGYAIDWSPVVPGRLVSGDCNNCIYLWEPNSAAATWSVDNAP-FIGHTASVE 85
           L+   H  EGY + WSP   G L+SG  ++ + LW+   A+    +D    + GH   VE
Sbjct: 154 LRLRGHDKEGYGLSWSPFKNGYLLSGSHDHKVCLWDVPGASQEKVLDALHIYEGHENVVE 213

Query: 86  DLQWSPKDHDIFAS 99
           D+ W+ KD ++F S
Sbjct: 214 DVSWNLKDENMFGS 227