Miyakogusa Predicted Gene
- Lj0g3v0103099.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0103099.1 tr|B9HWJ1|B9HWJ1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_566638 PE=4
SV=1,44.05,0.0000000004,Bromo adjacent homology domain,Bromo adjacent
homology (BAH) domain; BAH,Bromo adjacent homology (BA,gene.g7816.t1.1
(444 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g08850.1 670 0.0
Glyma08g43990.1 602 e-172
Glyma15g12410.1 348 6e-96
Glyma09g01510.1 282 4e-76
Glyma01g20780.1 232 5e-61
Glyma0022s00420.1 204 2e-52
Glyma07g29100.1 70 7e-12
>Glyma18g08850.1
Length = 653
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/443 (74%), Positives = 355/443 (80%), Gaps = 47/443 (10%)
Query: 1 MTVNDRCFVEWKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSVRHMCYVAAEEFLE 60
M VN+RCFVEWKEQFVSQERGNRVVHYYLKDS GE VLAVVGTERSVRHMCYV AEEFLE
Sbjct: 1 MAVNNRCFVEWKEQFVSQERGNRVVHYYLKDSAGEPVLAVVGTERSVRHMCYVVAEEFLE 60
Query: 61 ICGKEGCVPAGFKWRSRREVVDWLTSMLSKQLVQGERSGSPGHNLALPHETSNGCENDGT 120
ICGKEG +P GFKWRSRREVVDWLTS LSKQ +QG+RS
Sbjct: 61 ICGKEGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRS---------------------- 98
Query: 121 ALSAQIADHKDILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFVFVMG 180
DIVWSGVAW CGKQLKHYPAF RNGIKIAIQSFVFVMG
Sbjct: 99 ----------------------DIVWSGVAWRCGKQLKHYPAFFRNGIKIAIQSFVFVMG 136
Query: 181 KEEKHFVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAE 240
K E H++AY+EDMYEDRRGQKKVKVRWFHHNQEVKG +PVRN HPREVFIT YSQVISAE
Sbjct: 137 KGENHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVVPVRNLHPREVFITPYSQVISAE 196
Query: 241 CVDGLATVLTREHYERCMPYFSPTSTDRIHLCFRQFKGNKVKPFDLSKLRGYYAQSVLSC 300
CVDG ATVLTREHYE+CMP+FSPTS DRIHLCFRQF+ NKVKPFD SKLRGYY Q +LSC
Sbjct: 197 CVDGSATVLTREHYEKCMPFFSPTSRDRIHLCFRQFRSNKVKPFDFSKLRGYYTQPILSC 256
Query: 301 LHLDSNQKPEKSNNLAREDEDLGVGDDAKLGAKRSRSDRGSPQSRIGRRGVRKLIRSEQM 360
LH DS Q PE +L EDE+L G+D K+GAKR R D+GSPQS I R+GVRKLI+S+QM
Sbjct: 257 LHHDSIQNPE---SLVGEDEELSAGEDVKVGAKRRRGDKGSPQSWISRQGVRKLIKSKQM 313
Query: 361 MVHEMFQVVNYGSPDQRLLSLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFRCTVVQ 420
MV++ FQV NY ++RLLS KQ+E QPW+N TYKVDDKIELLCQDSGIRGCWFRCTVVQ
Sbjct: 314 MVYKTFQVANYARSERRLLSRKQVECQPWSNHTYKVDDKIELLCQDSGIRGCWFRCTVVQ 373
Query: 421 VARKQLKVQYDDVQDEDGSGNLQ 443
VARKQLKVQYDDVQDEDGSGNL+
Sbjct: 374 VARKQLKVQYDDVQDEDGSGNLE 396
>Glyma08g43990.1
Length = 700
Score = 602 bits (1551), Expect = e-172, Method: Compositional matrix adjust.
Identities = 311/483 (64%), Positives = 341/483 (70%), Gaps = 81/483 (16%)
Query: 1 MTVNDRCFVEWKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSVRHMCYVAAEEFLE 60
M VN+ CFVEWKEQFVSQERGNRVVHYYLKDS GESVLAVVGTERSVRHMCYV AEEFLE
Sbjct: 1 MAVNNCCFVEWKEQFVSQERGNRVVHYYLKDSAGESVLAVVGTERSVRHMCYVVAEEFLE 60
Query: 61 ICGKEGCVPAGFKWRSRREVVDWLTSMLSKQLVQGERSG--------SPGHNLA------ 106
ICG EG +P GFKWRSRREVVDWLTS LSKQ +QG+RSG +P A
Sbjct: 61 ICGMEGSIPTGFKWRSRREVVDWLTSTLSKQNLQGDRSGKQLSHKTTTPDGFCANPFCYK 120
Query: 107 -------------LPHETSNGCENDGTALSAQIADHKDILLSNCKLSTS----------- 142
+PH T LS I+ H +LL + +
Sbjct: 121 NAELAGRDWLMKNIPHHAGPCATLHCTFLSCFISYHFLLLLHSSTFYSVLAWLVMAQYKG 180
Query: 143 --DIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFVFVMGKEEKHFVAYLEDMYEDRRGQ 200
+IVWSGVAW CGKQLKHYPAF RNGIKIAIQSFVFVMGK E H++AY+EDMYEDRRGQ
Sbjct: 181 MLNIVWSGVAWRCGKQLKHYPAFFRNGIKIAIQSFVFVMGKGENHYIAYVEDMYEDRRGQ 240
Query: 201 KKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAECVDGLATVLTREHYERCMPY 260
KK+KVRWFHHNQEVKG +PVRNPHPREVFIT YSQVIS+ECVDG ATVLTRE +E+CMP+
Sbjct: 241 KKIKVRWFHHNQEVKGVVPVRNPHPREVFITPYSQVISSECVDGSATVLTREDFEKCMPF 300
Query: 261 FSPTSTDRIHLCFRQFKGNKVKPFDLSKLRGYYAQSVLSCLHLDSNQKPEKSNNLAREDE 320
FSPTS DRIHLCFRQF+ NK+KPFDLSKLRGYYAQ +LSCLHLDS Q PE LAREDE
Sbjct: 301 FSPTSRDRIHLCFRQFRSNKIKPFDLSKLRGYYAQPILSCLHLDSIQHPE---FLAREDE 357
Query: 321 DLGVGDDAKLGAKRSRSDRGSPQSRIGRRGVRKLIRSEQMMVHEMFQVVNYGSPDQRLLS 380
+L GDD K+G KR R D+G+ Q +G
Sbjct: 358 ELSAGDDVKVGVKRRRGDKGNKQMMVGS-------------------------------- 385
Query: 381 LKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSG 440
QPW+N YKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSG
Sbjct: 386 ------QPWSNHKYKVDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSG 439
Query: 441 NLQ 443
NL+
Sbjct: 440 NLE 442
>Glyma15g12410.1
Length = 774
Score = 348 bits (893), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 209/459 (45%), Positives = 277/459 (60%), Gaps = 31/459 (6%)
Query: 8 FVEWKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSVRHMCYVAAEEFLEICGKEGC 67
FV W+EQ + QERGNRV+H+YLKD+ G SVLAVVGTERSVRHM YVA + FL+ G
Sbjct: 10 FVTWEEQVICQERGNRVIHFYLKDALGNSVLAVVGTERSVRHMMYVAPDHFLQAYGSTQP 69
Query: 68 VPAGFKWRSRREVVDWLTSMLSKQ-------------------LVQGERSGSPGHNLALP 108
+ A FKWR+RREVVDWLT ++S+ LV+ G + A
Sbjct: 70 INA-FKWRARREVVDWLTCLVSRNHVRLWMHVLNVATVCMVFWLVEFYHEGVQLEHSAQA 128
Query: 109 HETSNGCENDGTALSAQIADHKDILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGI 168
E+ G ++ +I K ++ K +SDI WSG +W C KQLKHY FCRNG
Sbjct: 129 DESLKTL-TPGINVNNRILPDK-MISRKLKFQSSDIEWSGFSWFCAKQLKHYSGFCRNGT 186
Query: 169 KIAIQSFVFVMGKEEKHFVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREV 228
I + SFV++M +EE H++ YLEDMYED++ QKKVKVRWFH QEVK I EV
Sbjct: 187 TINVHSFVYIMAEEENHYLGYLEDMYEDKKRQKKVKVRWFHRGQEVKHVIAQLKLQEGEV 246
Query: 229 FITSYSQVISAECVDGLATVLTREHYERCMPYFSPTSTDRIHLCFRQFKGNKVKPFDLSK 288
FIT + QVISAECV+G ATVLT +HYE+ + S TS IH+CFRQFK NK+KPF L+K
Sbjct: 247 FITPHVQVISAECVNGPATVLTPKHYEKYLAAVSHTSLSEIHMCFRQFKNNKLKPFALTK 306
Query: 289 LRGYYAQSVLSCL----HLDSNQKPEKSNNLAREDEDLGVGDDAKLGAKRSRSDRGSPQS 344
LRGY QSV+S L H K EKS+ +DE+ D + KR RS +
Sbjct: 307 LRGYSNQSVVSSLNSSTHSKRKAKFEKSH--TDDDENFTQDDPLRSSNKRVRSSKDHVLE 364
Query: 345 RIGRRGVRKLIRSEQMMVHEMFQVVNYGSPDQRLLSLKQIEFQPWNNPTYKVDDKIELLC 404
+ G G++ + +++M E ++ + +K I +P +++V KIE+LC
Sbjct: 365 K-GFSGLQISLPTKEMAKCEPKYPSLKLKLSRKTMGIKVIGPKP--QLSFQVGAKIEVLC 421
Query: 405 QDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSGNLQ 443
QDSGIRGCWFRC ++ ++ + LKVQYDD+ + DG L+
Sbjct: 422 QDSGIRGCWFRCKILSMSPRLLKVQYDDLLEIDGPQKLE 460
>Glyma09g01510.1
Length = 472
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 168/380 (44%), Positives = 229/380 (60%), Gaps = 19/380 (5%)
Query: 71 GFKWRSRREVVDWLTSMLSKQL-----VQGERSGSPGHNLALPHETSNGCENDGTALSAQ 125
FKWR+RREVVDWLT ++S+ VQ + S +L + ++G + L +
Sbjct: 10 AFKWRARREVVDWLTCLVSRNRSHHAGVQLDDSAQAVESLKI---LTSGINVNNRILPDK 66
Query: 126 IADHKDILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFVFVMGKEEKH 185
+ K K +SDI WSG +W C KQLKHY FCRNG I + SFV++M +EE H
Sbjct: 67 MISRK------LKFQSSDIQWSGFSWFCAKQLKHYSGFCRNGTTINVHSFVYIMAEEENH 120
Query: 186 FVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAECVDGL 245
++ Y+EDMYED++ QKKVKVRWFHH QEVK IP N EVFIT + QVISAECV+G
Sbjct: 121 YLGYVEDMYEDKKRQKKVKVRWFHHGQEVKHVIPQLNLQEGEVFITPHVQVISAECVNGP 180
Query: 246 ATVLTREHYERCMPYFSPTSTDRIHLCFRQFKGNKVKPFDLSKLRGYYAQSVLSCLHLDS 305
ATVLT +HYE+ + TS IH+CFRQFK NK+KPF L+KLRGY Q+VLS L+ +
Sbjct: 181 ATVLTPKHYEKYLAAVPHTSLSEIHMCFRQFKNNKLKPFTLTKLRGYSNQTVLSSLNSPT 240
Query: 306 NQKPEKSNNLAREDEDLGVGDDAKLGA--KRSRSDRGSPQSRIGRRGVRKLIRSEQMMVH 363
K + +R D+D D L + KR+RS + + G ++ + ++M
Sbjct: 241 LSKRKAKFEKSRTDDDENFTQDDALRSSNKRNRSSKDHVLEK-GFSCLQISVPVKEMTKC 299
Query: 364 EMFQVVNYGSPDQRLLSLKQIEFQPWNNPTYKVDDKIELLCQDSGIRGCWFRCTVVQVAR 423
E ++ L +K I +P +++V KIE+LCQDSGIRGCWFRC ++ ++
Sbjct: 300 EPKHPSLKLKLSRKTLGIKVIGPKP--QLSFQVGAKIEVLCQDSGIRGCWFRCKILSMSP 357
Query: 424 KQLKVQYDDVQDEDGSGNLQ 443
+ LKVQYDD+ D DG L+
Sbjct: 358 RLLKVQYDDLLDIDGPQKLE 377
>Glyma01g20780.1
Length = 425
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 231/463 (49%), Gaps = 72/463 (15%)
Query: 8 FVEWKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSVRHMCYVAAEEFLEICGKEGC 67
+V W+E F+S ++G R VHY LK GG S LAV+G E+S++HM Y A I
Sbjct: 8 YVSWEEVFMSNDQGRREVHYLLKRRGGGSDLAVLGKEKSLKHMSYRYA-----IRNTSSF 62
Query: 68 VPAGFKWRSRREVVDWLTSMLSKQLVQGERSGSPGHNLALPHETSNGCENDGTALSAQIA 127
P FK RSRREVV+WL S++S S S + H G E + AL
Sbjct: 63 RPY-FKLRSRREVVNWLDSIVSD-------SSSGDAAMVGKH----GYEPEIGAL----- 105
Query: 128 DHKDILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFVFVMGKEEKHFV 187
KD L + T + W G+ W C K+ KHY A+ RNG +I++ F+FV+ +E+K V
Sbjct: 106 --KDNQLQRMRNCTKEFSWIGLPWACKKRRKHYQAYKRNGFQISVHDFIFVLAEEDKRLV 163
Query: 188 AYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAECVDGLAT 247
AYLED+YED +G K V VRWFH EV A+P + REVF + Y Q +S EC+DGLA
Sbjct: 164 AYLEDLYEDSKGNKMVVVRWFHKIDEVGIALP-HSFSDREVFFSLYLQDLSIECIDGLAF 222
Query: 248 VLTREHYERCMPYFSPTSTDRIHLCFRQFKGNKVKPFDLSKLRGYYAQSVLSCLH----- 302
VL+ HYE+ T + +C QF + VKPFD+++++GY+ Q +L ++
Sbjct: 223 VLSPGHYEKFQNEARCTHLEPF-ICNHQFDNDDVKPFDITQIKGYWKQEILRYMYTQLDS 281
Query: 303 --------------LDSNQ------KPEKSNNLAREDEDLGVGDDAKLGAKRSRSDRGSP 342
LD N +P+K L + D+ D L + + + +
Sbjct: 282 KSSGSSRQSDDDLELDENHMTTVFIRPKKRLRLTKADDAKEAVDLVGLKTENVNNSKNNT 341
Query: 343 QSRIGRRGVRKLIRSEQMMVHEMFQVVNYGSPDQRLLSLKQIEFQPWNNPTYKVDDKIEL 402
+ G S +++ H G+ + L V +E+
Sbjct: 342 KINTGN-------NSGKLIGHTNMTATIKGTNEHASHHL-------------VVGSLVEV 381
Query: 403 LCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDE-DGSGNLQV 444
L QD G+RGCWFR +V++ + ++KVQY D+QD D + L+V
Sbjct: 382 LSQDGGMRGCWFRASVIKKNKDKVKVQYQDIQDAVDETKKLEV 424
>Glyma0022s00420.1
Length = 643
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/314 (39%), Positives = 169/314 (53%), Gaps = 27/314 (8%)
Query: 7 CFVEWKEQFVSQERGNRVVHYYLKDSGGESVLAVVGTERSV-RHMCYVAAEEFLEICGKE 65
+V W E FVS ++G R VHY LK GG S LAV+G E+S+ RHM Y A
Sbjct: 12 VYVSWDEVFVSNDKGRREVHYLLKRRGGGSDLAVLGKEKSLLRHMSYRYA------IRNA 65
Query: 66 GCVPAGFKWRSRREVVDWLTSMLSKQLVQGERSGSPGHNLALPHETSNGCENDGT-ALSA 124
K RSRREVVDWL S++S + + +L L +S G
Sbjct: 66 ALFKPYLKLRSRREVVDWLDSIVSGRDFRWL-------DLKLNDSSSGDAVMVGKHGYEP 118
Query: 125 QIADHKDILLSNCKLSTSDIVWSGVAWTCGKQLKHYPAFCRNGIKIAIQSFVFVMGKEEK 184
+I KD L T + W G+ WTC K+ KHY A+ RNG +I++ FVFV+ +E+K
Sbjct: 119 EIGALKDNQLQKMHSCTKEFSWIGLPWTCKKRRKHYQAYKRNGFQISVHDFVFVLAEEDK 178
Query: 185 HFVAYLEDMYEDRRGQKKVKVRWFHHNQEVKGAIPVRNPHPREVFITSYSQVISAECVDG 244
VAYLED+YED RG + V VRWFH EV A+P + REVF + Y Q +S EC+DG
Sbjct: 179 RLVAYLEDLYEDSRGNRMVVVRWFHKIDEVGIALP-HSFSDREVFFSLYLQDLSIECIDG 237
Query: 245 LATVLTREHY-----ERCMPYFSPTSTDRIHLCFRQFKGNKVKPFDLSKLRGYYAQSVLS 299
LA VL+ HY E C + P +C QF + VKPFD+++++GY+ Q +L
Sbjct: 238 LAFVLSPGHYKKFQNEACRTHLEP------FMCNHQFDNDDVKPFDITRIKGYWKQEILR 291
Query: 300 CLHLDSNQKPEKSN 313
++ + K S+
Sbjct: 292 YMYAQLDLKSSGSS 305
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 396 VDDKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQD 435
V ++E+L QDSG+RGCWFR +V++ + ++KVQY D+ D
Sbjct: 387 VGSQVEVLSQDSGMRGCWFRASVIKKHKDKVKVQYQDILD 426
>Glyma07g29100.1
Length = 75
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 146 WSGVAWTCGKQLKHYPAFCRNGIKIAIQSFVFVMGKEEKHFVAYLEDMYEDRRGQKKVKV 205
W G+ W C K+ KHY A+ RN E+KH VAYLED+YED RG K V V
Sbjct: 3 WIGLPWACKKRRKHYQAYKRN---------------EDKHVVAYLEDLYEDSRGNKMVVV 47
Query: 206 RWFHHNQEVKGAIPVRNPHPREVFITSY 233
WFH EV A+P + REVF + Y
Sbjct: 48 CWFHKIDEVGIALP-HSFSDREVFFSLY 74