Miyakogusa Predicted Gene

Lj0g3v0102809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102809.1 Non Chatacterized Hit- tr|D8SWW0|D8SWW0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,36.04,0.000000001,seg,NULL; Occludin_ELL,Occludin/RNA
polymerase II elongation factor, ELL domain,CUFF.5801.1
         (344 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g20920.1                                                       478   e-135
Glyma07g01500.1                                                       448   e-126

>Glyma08g20920.1 
          Length = 1184

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/380 (67%), Positives = 288/380 (75%), Gaps = 38/380 (10%)

Query: 1    MDSNYPKQGEMGSKSKEGRQSTQSLLGTFPTDN-RFSLDKSPVVDGLGVSLQREPSDLEL 59
            MDS Y KQGEM  K KEGRQSTQS LGT P DN R   D+SPV +G G+SLQRE SDLEL
Sbjct: 806  MDSYYQKQGEMVGKLKEGRQSTQSHLGTSPKDNNRIGFDESPVTNGRGISLQRELSDLEL 865

Query: 60   GEFRESTPDETHVTKQFERKGPFKHLENKK-TSEDRNSDITKGKP--------------F 104
            GEFRESTPDETHV KQFE+KG FK LENK  TSEDRNSDITK KP              F
Sbjct: 866  GEFRESTPDETHVAKQFEQKGSFKLLENKANTSEDRNSDITKVKPSLKATSDSGKPSSAF 925

Query: 105  VSSSFPSNLQSTDKKNTENHFDDSTKSRSRVMPAEF--------------------NKFR 144
            V+S FPSNL +T+KKN++NHF+DSTKSRSRVM A                      +K+R
Sbjct: 926  VNSGFPSNLDNTNKKNSDNHFEDSTKSRSRVMQAHLQHLRADHAEVGSQNKLAEMSSKYR 985

Query: 145  NNESGVSQDIDLDGHTESNRRAPANGSK-QDTNLGINSYPVKESKRQTPNSLEAVADGGK 203
            N+ESGVSQD DL+G +ESNRR PAN SK QD+  G  SYPVKE KRQTPNS+E +ADGGK
Sbjct: 986  NSESGVSQDFDLEGRSESNRRVPANASKPQDSKRGNVSYPVKEIKRQTPNSVEEMADGGK 1045

Query: 204  DSVFAARNNIEQRKREXXXXXXXXXXXKYEKDEPELKGPIMTFSQYKEYVQEYGDKYDSY 263
            DSV A RN+ +Q+KRE           KYEKDEPELKGPI TFSQYKEYVQE+ DKYDSY
Sbjct: 1046 DSV-ADRNHSDQKKRESSSDENSCSYSKYEKDEPELKGPIRTFSQYKEYVQEFQDKYDSY 1104

Query: 264  CSLYKILESYRNEFQQLGDDLVYAKGRDMDRYYDILEQLKESYRRCGPRHKRLKKIFVVL 323
            CSL KILE YR+EFQ+LG+DL +AKGRDMDRYYDI+EQLKESYRRCGPRHKRLKKIFVVL
Sbjct: 1105 CSLNKILEGYRDEFQKLGNDLEHAKGRDMDRYYDIVEQLKESYRRCGPRHKRLKKIFVVL 1164

Query: 324  HQELENIKLRIKDFAHSYSK 343
            H ELEN+K RIKDF++SY+K
Sbjct: 1165 HTELENLKGRIKDFSNSYNK 1184


>Glyma07g01500.1 
          Length = 1092

 Score =  448 bits (1153), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 245/366 (66%), Positives = 273/366 (74%), Gaps = 43/366 (11%)

Query: 1    MDSNYPKQGEMGSKSKEGRQSTQSLLGTFPTDN-RFSLDKSPVVDGLGVSLQREPSDLEL 59
            MDS Y KQGEM  K KEGRQSTQS LGT P DN +   D+SP  +G G+SLQRE SDLEL
Sbjct: 747  MDSYYQKQGEMVGKLKEGRQSTQSHLGTSPKDNNQIGFDQSPETNGRGISLQRELSDLEL 806

Query: 60   GEFRESTPDETHVTKQFERKGPFKHLENKK-TSEDRNSDITKGKPFVSSSFPSNLQSTDK 118
            GEFRESTPDETHV KQFERKG FK LENK  TSEDRNSDITK                  
Sbjct: 807  GEFRESTPDETHVAKQFERKGSFKQLENKANTSEDRNSDITK------------------ 848

Query: 119  KNTENHFDDSTKSRSRVM----------PAEF----------NKFRNNESGVSQDIDLDG 158
             N++NHF+DSTKSRSRVM          PAE           +K+RN+ESG SQD DL+G
Sbjct: 849  -NSDNHFEDSTKSRSRVMQTHSQHLRADPAEVGSQNKLAEMSSKYRNSESGGSQDFDLEG 907

Query: 159  HTESNRRAPANGSK-QDTNLGINSYPVKESKRQTPNSLEAVADGGKDSVFAARNNIEQRK 217
             +ESNRR PAN SK QD+  GI S PVKESKRQTPNS+E +ADGGKDSVFA RN+ +Q+K
Sbjct: 908  RSESNRRVPANASKPQDSKRGIVSDPVKESKRQTPNSVEEMADGGKDSVFADRNHSDQKK 967

Query: 218  REXXXXXXXXXXXKYEKDEPELKGPIMTFSQYKEYVQEYGDKYDSYCSLYKILESYRNEF 277
            RE           KYEKDEPELKGPI TFSQYKEYVQE+ DKYDSYCSL KILE YR++F
Sbjct: 968  RESSDENSCSYS-KYEKDEPELKGPIRTFSQYKEYVQEFQDKYDSYCSLNKILEGYRDQF 1026

Query: 278  QQLGDDLVYAKGRDMDRYYDILEQLKESYRRCGPRHKRLKKIFVVLHQELENIKLRIKDF 337
            Q+LG+DL  AKGRDMDRYYDI+EQLKESYRRCGPRHKRL+KIFVVLH ELEN+K RIKDF
Sbjct: 1027 QKLGNDLELAKGRDMDRYYDIVEQLKESYRRCGPRHKRLRKIFVVLHTELENLKRRIKDF 1086

Query: 338  AHSYSK 343
            A+SY+K
Sbjct: 1087 ANSYNK 1092