Miyakogusa Predicted Gene

Lj0g3v0102549.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102549.1 tr|A9SRP5|A9SRP5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_187673,30.8,8e-19,seg,NULL,CUFF.5791.1
         (279 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g07850.2                                                       311   5e-85
Glyma06g07850.1                                                       311   5e-85

>Glyma06g07850.2 
          Length = 2427

 Score =  311 bits (797), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 171/274 (62%), Positives = 192/274 (70%), Gaps = 20/274 (7%)

Query: 1   MGKETEILSRLAANHLHLAQFEPXXXXXXXXXXXXXXXXXXILQTIVARSGRFPNIAWST 60
           MG+ETEILSRL ANHLHLAQFEP                  ILQTIVARSGR PN+AWS+
Sbjct: 1   MGRETEILSRLVANHLHLAQFEPLRGVLLALRARNRDLARDILQTIVARSGRVPNVAWSS 60

Query: 61  SCPSPAHLTYLSTLELLQFDGDASSAWSFDPETLRLRAEFLLLVQNLIDLVSENEGLLDK 120
           SCPSPA LT+LSTLELLQ D +ASSAW+FD ETLRLRAEFLLLVQ+LIDLVSE +G    
Sbjct: 61  SCPSPALLTFLSTLELLQMD-NASSAWNFDEETLRLRAEFLLLVQDLIDLVSECDG---- 115

Query: 121 DGGEWEMCRRVLDRGMELGVKRLSVDEDG-----GGSERSETSVAPVEEDELMSLRKLVL 175
              EW  CR VLDR +ELGVKRL VD DG     G    +  +   VEE E  SLRKL+L
Sbjct: 116 ---EWGNCRSVLDRVLELGVKRLRVDADGENEIDGIGSGNGNAATVVEEAEFTSLRKLIL 172

Query: 176 NHADIFDALCGNIHRQIRHWECEDPGLAXXXXXXXXXXXXXXXXMLSGIQRTVQVVHLDA 235
            HA +FDALC N+HRQIRHWE ED                    +L GIQRTVQVVHLDA
Sbjct: 173 EHARVFDALCVNVHRQIRHWESED------SGEGSEELEEEDVKVLRGIQRTVQVVHLDA 226

Query: 236 MRESIKAGEAEGAVSHIRFLHFDHGL-EQSEYRF 268
           MRES+++G+AEGAVSHIRFLHFD+G+ EQSEYR 
Sbjct: 227 MRESLESGDAEGAVSHIRFLHFDYGIEEQSEYRI 260


>Glyma06g07850.1 
          Length = 2427

 Score =  311 bits (797), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 171/274 (62%), Positives = 192/274 (70%), Gaps = 20/274 (7%)

Query: 1   MGKETEILSRLAANHLHLAQFEPXXXXXXXXXXXXXXXXXXILQTIVARSGRFPNIAWST 60
           MG+ETEILSRL ANHLHLAQFEP                  ILQTIVARSGR PN+AWS+
Sbjct: 1   MGRETEILSRLVANHLHLAQFEPLRGVLLALRARNRDLARDILQTIVARSGRVPNVAWSS 60

Query: 61  SCPSPAHLTYLSTLELLQFDGDASSAWSFDPETLRLRAEFLLLVQNLIDLVSENEGLLDK 120
           SCPSPA LT+LSTLELLQ D +ASSAW+FD ETLRLRAEFLLLVQ+LIDLVSE +G    
Sbjct: 61  SCPSPALLTFLSTLELLQMD-NASSAWNFDEETLRLRAEFLLLVQDLIDLVSECDG---- 115

Query: 121 DGGEWEMCRRVLDRGMELGVKRLSVDEDG-----GGSERSETSVAPVEEDELMSLRKLVL 175
              EW  CR VLDR +ELGVKRL VD DG     G    +  +   VEE E  SLRKL+L
Sbjct: 116 ---EWGNCRSVLDRVLELGVKRLRVDADGENEIDGIGSGNGNAATVVEEAEFTSLRKLIL 172

Query: 176 NHADIFDALCGNIHRQIRHWECEDPGLAXXXXXXXXXXXXXXXXMLSGIQRTVQVVHLDA 235
            HA +FDALC N+HRQIRHWE ED                    +L GIQRTVQVVHLDA
Sbjct: 173 EHARVFDALCVNVHRQIRHWESED------SGEGSEELEEEDVKVLRGIQRTVQVVHLDA 226

Query: 236 MRESIKAGEAEGAVSHIRFLHFDHGL-EQSEYRF 268
           MRES+++G+AEGAVSHIRFLHFD+G+ EQSEYR 
Sbjct: 227 MRESLESGDAEGAVSHIRFLHFDYGIEEQSEYRI 260