Miyakogusa Predicted Gene

Lj0g3v0102189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102189.1 tr|G7ZYM9|G7ZYM9_MEDTR FBD-associated F-box
protein OS=Medicago truncatula GN=MTR_076s0012 PE=4
SV=1,35.84,9e-18,domain in FBox and BRCT domain containing pl,FBD;
FBD,FBD,CUFF.5758.1
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46590.2                                                        84   7e-17
Glyma08g46320.1                                                        84   8e-17
Glyma18g35320.1                                                        77   1e-14
Glyma18g35360.1                                                        74   6e-14
Glyma18g35330.1                                                        70   1e-12
Glyma17g05620.1                                                        70   1e-12
Glyma18g35370.1                                                        64   1e-10
Glyma08g46590.1                                                        49   2e-06

>Glyma08g46590.2 
          Length = 380

 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 20/160 (12%)

Query: 1   MEHMKSGTILPVFVFRNLISIELCFDNYFSVWDGVLEVLSYCPKLQNLAIEKPAFKGLYK 60
           MEH +   ++P F  +NL  +EL +      W  VLEV+  CP LQ L I+  +     +
Sbjct: 235 MEHKEEANLIPEF--QNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTR 292

Query: 61  DGVLVELPYRPMLQTLIDMQFHKEKWAELVPECVSLHLTTCSIRNYRGWDDDFKFAEFIL 120
           D    + P+                    VP  +SLHL TC IR Y G   + +FA +I+
Sbjct: 293 DDEGADWPF-----------------PRSVPSSISLHLKTCFIRCYGGSKGELRFARYIM 335

Query: 121 QNVSFLQTMTLHSAPSRKEEKQWVFKHLSWCPRISTACKI 160
           +N   L+TM + +  SR ++K  + K LS CPR S  CK+
Sbjct: 336 RNARHLRTMKISTYASR-QQKFNMLKKLSLCPRRSRICKL 374


>Glyma08g46320.1 
          Length = 379

 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 31/158 (19%)

Query: 14  VFRNLISIELCFDNYFSV-WDGVLEVLSYCPKLQNLAIEKPAFKGLYKDGVLVELPYRPM 72
           VF NLI +E+ F  +F V W+ V E++ +CPKLQ   +  P          L   P  PM
Sbjct: 246 VFHNLIHLEVSF--WFVVRWNLVFEMIKHCPKLQTFVLFLP----------LESFP--PM 291

Query: 73  LQTLIDMQFHKEKWAELVPECVSLHLTTCSIRNYRGWDDDFKFAEFILQNVSFLQTMTLH 132
           + T          + ++VPEC+S  L  C+I NY+G   + +FA++ILQN   LQ+MT+H
Sbjct: 292 VWT----------FPQIVPECISSKLRRCTIMNYKGKKYELQFAKYILQNSRALQSMTIH 341

Query: 133 SAPSRK------EEKQWVFKHLSWCPRISTACKIFLNA 164
           +   R       ++K  + + L+ CP+ ST CKI   +
Sbjct: 342 NKRVRNTYFANPQDKIRILQELAMCPKSSTTCKILFKS 379


>Glyma18g35320.1 
          Length = 345

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 31/150 (20%)

Query: 15  FRNLISIELCFDNYFSVWDG--VLEVLSYCPKLQNLAIEKPAFKGLYKDGVLVELPYRPM 72
           F+NL  +E     +FS   G  VL+++  CPKLQ L I K     L+ +G          
Sbjct: 222 FQNLTHLE-----FFSYRGGFFVLDLIKRCPKLQILTIYKVD-SALFAEG---------- 265

Query: 73  LQTLIDMQFHKEKWAELVPECVSLHLTTCSIRNYRGWDDDFKFAEFILQNVSFLQTMTLH 132
                        + + VP C+S HL  C+++ Y G  D+F+F  +I++N  +LQ MT+ 
Sbjct: 266 ------------DYPQSVPICISFHLKICTLKRYNGSKDEFRFVTYIMENSKYLQIMTIS 313

Query: 133 -SAPSRKEEKQWVFKHLSWCPRISTACKIF 161
            ++   KE K  +F+ LS C R ST+CK+ 
Sbjct: 314 CNSDINKERKLEMFQKLSLCTRCSTSCKLL 343


>Glyma18g35360.1 
          Length = 357

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 28/152 (18%)

Query: 8   TILPVFVFRNLISIELCFDNYFSVWDGVLEVLSYCPKLQNLAIEKP-AFKGLYKDGVLVE 66
           T + +F F NL  +EL  D ++  WD +L++L  CP LQ L I+K  +F     D     
Sbjct: 193 TFVGLFTFVNLTYLELIVDAHY--WDWLLKLLHCCPNLQILVIDKGNSFNKTSND----- 245

Query: 67  LPYRPMLQTLIDMQFHKEKW--AELVPECVSLHLTTCSIRNYRGWDDDFKFAEFILQNVS 124
                            E W  + LVP+C+S  L TC  + Y GW+ +F+FA +I+QN  
Sbjct: 246 -----------------ENWVYSHLVPKCLSSKLKTCRFQKYEGWECEFQFARYIMQNAR 288

Query: 125 FLQTMTLHSAP-SRKEEKQWVFKHLSWCPRIS 155
            L   T+ S   S    K  + K LS CPRIS
Sbjct: 289 ALCAFTICSTGFSPLAAKFQMIKRLSSCPRIS 320


>Glyma18g35330.1 
          Length = 342

 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 22/143 (15%)

Query: 15  FRNLISIELCFDNYFSVWDGVLEVLSYCPKLQNLAIEKPAFKGLYKDGVLVELPYRPMLQ 74
           F NL  +EL F   F+V   ++ +L  CP LQ L +++                    ++
Sbjct: 220 FLNLTHMELIFRFRFNVLGRLINLLHECPNLQILVVDEGNL----------------FVK 263

Query: 75  TLIDMQFHKEKWAELVPECVSLHLTTCSIRNYRGWDDDFKFAEFILQNVSFLQTMTLHS- 133
           T  D+ +      + VP+C+S  L  C ++ Y G + + +FA ++LQN   L +MT++S 
Sbjct: 264 TSSDVSY-----PQFVPKCLSTQLKRCCVKKYGGQESELRFARYVLQNARVLYSMTIYSI 318

Query: 134 APSRKEEKQWVFKHLSWCPRIST 156
           + S   E+  + K LS CPRIS 
Sbjct: 319 SSSNSGERLQMIKKLSSCPRISA 341


>Glyma17g05620.1 
          Length = 158

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 1/78 (1%)

Query: 86  WAELVPECVSLHLTTCSIRNYRGWDDDFKFAEFILQNVSFLQTMTLHSAPSRKE-EKQWV 144
           + + +P CVSLHL TC + NY G   +F+FA +I+QN S LQTMT+ +  S  E EK  +
Sbjct: 80  YPQSIPTCVSLHLKTCRLTNYVGSKGEFQFARYIMQNASHLQTMTICTNTSSNEGEKLEM 139

Query: 145 FKHLSWCPRISTACKIFL 162
            ++LS C R S  CK+  
Sbjct: 140 IENLSSCTRCSATCKLLF 157


>Glyma18g35370.1 
          Length = 409

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 27/163 (16%)

Query: 4   MKSGTILPVFVFRNLISIELCFDNYFSVWDGVLEVLSYCPKLQNLAIEKPAFKGLYKDGV 63
           +K  +   + VF  LI +E+ F NY   WD +  +L    KL+ L I K   K  Y  G 
Sbjct: 271 LKHASTSDIPVFDKLIQLEISFGNY--SWDLLASLLQRSHKLEVLTIYKEPQK--YAKG- 325

Query: 64  LVELPYRPMLQTLIDMQFHKEKWAE--LVPECVSLHLTTCSIRNYRGWDDDFKFAEFILQ 121
                              + +W    LVPEC+ LHL T  +R Y+G + +  F  +I+Q
Sbjct: 326 ------------------QEPRWIHPLLVPECL-LHLKTFCLREYQGLETELDFVGYIMQ 366

Query: 122 NVSFLQTMTLHSAPS-RKEEKQWVFKHLSWCPRISTACKIFLN 163
           N   L+TMT++ + S   EEK  + +HLS   R    C+I  +
Sbjct: 367 NARVLETMTIYISSSLGSEEKLQIRRHLSILQRNFETCQIVFH 409


>Glyma08g46590.1 
          Length = 515

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 19/108 (17%)

Query: 1   MEHMKSGTILPVFVFRNLISIELCFDNYFSVWDGVLEVLSYCPKLQNLAIEKPAFKGLYK 60
           MEH +   ++P F  +NL  +EL +      W  VLEV+  CP LQ L I+  +     +
Sbjct: 413 MEHKEEANLIPEF--QNLTHLELGYSECTRDWVDVLEVIQRCPNLQILDIDMGSIDMTTR 470

Query: 61  DGVLVELPYRPMLQTLIDMQFHKEKWAELVPECVSLHLTTCSIRNYRG 108
           D    + P+                    VP  +SLHL TC IR Y G
Sbjct: 471 DDEGADWPF-----------------PRSVPSSISLHLKTCFIRCYGG 501