Miyakogusa Predicted Gene
- Lj0g3v0101809.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101809.1 Non Chatacterized Hit- tr|D8RPF0|D8RPF0_SELML
Putative uncharacterized protein (Fragment) OS=Selagin,56.96,4e-19,no
description,Nucleotide-binding, alpha-beta plait; seg,NULL;
RNA-binding domain, RBD,NULL;
RRM,RNA,NODE_40706_length_490_cov_160.493881.path3.1
(166 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g36670.1 152 1e-37
Glyma02g04980.4 143 8e-35
Glyma16g23010.5 142 1e-34
Glyma16g23010.4 142 1e-34
Glyma16g23010.3 142 1e-34
Glyma16g23010.1 142 1e-34
Glyma16g23010.6 142 2e-34
Glyma02g04980.3 142 2e-34
Glyma02g04980.2 142 2e-34
Glyma16g23010.2 142 2e-34
Glyma02g04980.1 141 2e-34
Glyma08g40910.1 122 2e-28
Glyma08g45200.1 110 8e-25
Glyma18g07500.1 109 1e-24
Glyma10g41320.1 100 7e-22
Glyma11g08670.1 96 2e-20
Glyma20g25930.1 66 2e-11
Glyma19g38790.1 50 8e-07
Glyma18g48360.1 50 1e-06
Glyma09g38020.1 50 1e-06
Glyma20g24730.1 49 3e-06
Glyma10g42320.1 49 3e-06
>Glyma01g36670.1
Length = 246
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/82 (89%), Positives = 76/82 (92%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E +N G TLYVTGLSSRVTERDLEEHF+KEGKVASCFLVVEPRTRISRGFAFITMDTVE
Sbjct: 63 EAKNAGTTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTVED 122
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
ANRC KYLNQSVLE RY+TVER
Sbjct: 123 ANRCIKYLNQSVLEGRYITVER 144
>Glyma02g04980.4
Length = 246
Score = 143 bits (361), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 67 EPTNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 126
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+TVER
Sbjct: 127 AERCIKYLNQSVLEGRYITVER 148
>Glyma16g23010.5
Length = 164
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 65 EPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 124
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+T+ER
Sbjct: 125 AERCIKYLNQSVLEGRYITIER 146
>Glyma16g23010.4
Length = 164
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 65 EPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 124
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+T+ER
Sbjct: 125 AERCIKYLNQSVLEGRYITIER 146
>Glyma16g23010.3
Length = 164
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 65 EPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 124
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+T+ER
Sbjct: 125 AERCIKYLNQSVLEGRYITIER 146
>Glyma16g23010.1
Length = 240
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 65 EPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 124
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+T+ER
Sbjct: 125 AERCIKYLNQSVLEGRYITIER 146
>Glyma16g23010.6
Length = 232
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 57 EPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 116
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+T+ER
Sbjct: 117 AERCIKYLNQSVLEGRYITIER 138
>Glyma02g04980.3
Length = 172
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 67 EPTNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 126
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+TVER
Sbjct: 127 AERCIKYLNQSVLEGRYITVER 148
>Glyma02g04980.2
Length = 172
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 67 EPTNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 126
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+TVER
Sbjct: 127 AERCIKYLNQSVLEGRYITVER 148
>Glyma16g23010.2
Length = 168
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 65 EPSNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 124
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+T+ER
Sbjct: 125 AERCIKYLNQSVLEGRYITIER 146
>Glyma02g04980.1
Length = 285
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 74/82 (90%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDLEEHF+KEGKV+SCFLVVEPRTRISRGFAF+TM++ E
Sbjct: 67 EPTNPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAED 126
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A RC KYLNQSVLE RY+TVER
Sbjct: 127 AERCIKYLNQSVLEGRYITVER 148
>Glyma08g40910.1
Length = 128
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 67/82 (81%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEV 144
E N G+TLYVTGLSSRVTERDL++HF+KEGKV SCFLVVEP TRIS GFAF+TM +
Sbjct: 47 EPTNPGDTLYVTGLSSRVTERDLKKHFSKEGKVCSCFLVVEPSTRISHGFAFVTMGSAMD 106
Query: 145 ANRCFKYLNQSVLECRYLTVER 166
A C KYLNQSVLE Y++VE+
Sbjct: 107 AEHCNKYLNQSVLEGSYISVEQ 128
>Glyma08g45200.1
Length = 362
Score = 110 bits (274), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 64/79 (81%)
Query: 88 NGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEVANR 147
N GN LYVTGLS R+T+R+LE+HF+ EGKV LVV+P TR SRGF F+TM+T+E A+R
Sbjct: 45 NPGNNLYVTGLSPRITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEADR 104
Query: 148 CFKYLNQSVLECRYLTVER 166
C KYLN+SVLE R +TVE+
Sbjct: 105 CVKYLNRSVLEGRVITVEK 123
>Glyma18g07500.1
Length = 205
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 88 NGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEVANR 147
N GN LYVTGLS R+T+R+LE+HFA EGKV LVV+P TR SRGF F+TM+T+E A R
Sbjct: 107 NPGNNLYVTGLSPRITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEAER 166
Query: 148 CFKYLNQSVLECRYLTVER 166
C KYLN+SVLE R +TVE+
Sbjct: 167 CVKYLNRSVLEGRVITVEK 185
>Glyma10g41320.1
Length = 191
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 60/79 (75%)
Query: 88 NGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEVANR 147
N GN LYVTGLS+R+T+ DL ++F+KEGKV C LV +P T+ SRGF F+TM+T + A
Sbjct: 43 NPGNNLYVTGLSTRITDSDLHKYFSKEGKVVDCHLVKDPHTKESRGFGFVTMETNDDAEC 102
Query: 148 CFKYLNQSVLECRYLTVER 166
C KYLN+SV E R +TVE+
Sbjct: 103 CIKYLNRSVFEGRLITVEK 121
>Glyma11g08670.1
Length = 91
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 85 EDRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRT-RISRGFAFITMDTVE 143
E +N G LYVTGLSSRVT R+LEEHF+KEGK+ F + + RGFAFIT DTVE
Sbjct: 2 EAKNAGTALYVTGLSSRVTGRELEEHFSKEGKMRIIFDFLSIFICHLGRGFAFITKDTVE 61
Query: 144 VANRCFKYLNQSVLECRYLTVE 165
ANRC KYLNQSVLE +TVE
Sbjct: 62 DANRCIKYLNQSVLEGGDITVE 83
>Glyma20g25930.1
Length = 142
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 50/88 (56%), Gaps = 19/88 (21%)
Query: 88 NGGNTLYVTGLSSRVTERDLE------EHFAKEG-------------KVASCFLVVEPRT 128
N GN LYVTGLS+R+T+ DL + +K G +V C LV +P T
Sbjct: 48 NPGNNLYVTGLSTRITDSDLHYLLISSSNKSKYGLFDAPMPSLCANVQVVDCHLVKDPCT 107
Query: 129 RISRGFAFITMDTVEVANRCFKYLNQSV 156
+ SRGF+F+TM T A RC KYLN+SV
Sbjct: 108 KGSRGFSFVTMGTNGDAERCIKYLNRSV 135
>Glyma19g38790.1
Length = 317
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 86 DRNGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEVA 145
D N LYV L +T +L E F + G VAS +V + T SRGFAF+TM +VE A
Sbjct: 103 DSNDAGRLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRVTDRSRGFAFVTMGSVEDA 162
Query: 146 NRCFKYLNQSVLECRYLTV 164
+ + S + R + V
Sbjct: 163 KEAIRMFDGSQVGGRTVKV 181
>Glyma18g48360.1
Length = 832
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 93 LYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEVANRCFKYL 152
++V GL TE DL++ F K G V L++ P+T+ ++GFAF+ +TVE A R L
Sbjct: 200 VFVGGLDKDATEHDLKKVFGKVGVVTEVRLMINPQTKRNKGFAFLRFETVEQARRAVVEL 259
Query: 153 NQSVLECR 160
V+ +
Sbjct: 260 KNPVINGK 267
>Glyma09g38020.1
Length = 778
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 93 LYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEVANRCFKYL 152
++V GL TE DL++ F K G V L++ P+T+ ++GFAF+ +TVE A R L
Sbjct: 194 VFVGGLDKDATEHDLKKVFGKVGVVTEVRLMINPQTKRNKGFAFLRFETVEQARRAVVEL 253
Query: 153 NQSVLECR 160
V+ +
Sbjct: 254 KNPVINGK 261
>Glyma20g24730.1
Length = 279
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 91 NTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITM 139
N ++V GLS VTER LE FA+ GK+ C +++E T RGF FIT
Sbjct: 7 NRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITF 55
>Glyma10g42320.1
Length = 279
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 91 NTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITM 139
N ++V GLS VTER LE FA+ GK+ C +++E T RGF FIT
Sbjct: 7 NRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDTGRPRGFGFITF 55