Miyakogusa Predicted Gene

Lj0g3v0101539.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101539.1 Non Chatacterized Hit- tr|I1MW66|I1MW66_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27788
PE,85.45,0,Ribonuclease H-like,Ribonuclease H-like domain; no
description,NULL; DNA_pol_A_exo1,3'-5' exonucleas,CUFF.5705.1
         (228 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g24130.1                                                       390   e-109
Glyma05g13920.1                                                       342   1e-94
Glyma19g29260.1                                                       331   5e-91
Glyma05g11190.1                                                       287   7e-78
Glyma05g14390.1                                                       236   2e-62
Glyma06g46220.1                                                       120   1e-27
Glyma12g10530.1                                                       104   9e-23

>Glyma17g24130.1 
          Length = 871

 Score =  390 bits (1001), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 182/211 (86%), Positives = 196/211 (92%)

Query: 18  TTGPKPKVPFHIPTIRRPQDEYNILVNNTNMPFEHVWLQRSEDGDRFIHPLEKIFVLDFV 77
           T GPK KVPFHIPTIRRPQDEYNI+VNN NMPFEHVWLQRS+DG  FIHPLEK+ VL+FV
Sbjct: 147 TMGPKSKVPFHIPTIRRPQDEYNIVVNNANMPFEHVWLQRSDDGLSFIHPLEKLSVLNFV 206

Query: 78  DKDPGDVLPKKPPPIESTPFKLVEEVKDLKDLAAKLRSVDEFAVDLEHNQYRSFQGLTCL 137
           D + GDV+P KPP IESTPFKLVEEVKDLK+LAAKLRSV+EFAVDLEHNQYRSFQGLTCL
Sbjct: 207 DTNLGDVVPVKPPSIESTPFKLVEEVKDLKELAAKLRSVNEFAVDLEHNQYRSFQGLTCL 266

Query: 138 MQISTRTEDFVVDTLKLRIHIGPYLREVFKDPTKRKVMHGADRDILWLQRDFGIYICNLF 197
           MQISTRTEDF+VDTLKLRIHIGPYLRE+FKDP KRKVMHGADRDI WLQRDFGIYICNLF
Sbjct: 267 MQISTRTEDFIVDTLKLRIHIGPYLREIFKDPAKRKVMHGADRDIAWLQRDFGIYICNLF 326

Query: 198 DTGQASKVLKLDRNSLEYLLHHFVEVTANKE 228
           DT QASK+L L+RNSLE++LHHF EVTANKE
Sbjct: 327 DTHQASKLLNLERNSLEHILHHFCEVTANKE 357


>Glyma05g13920.1 
          Length = 383

 Score =  342 bits (878), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 161/207 (77%), Positives = 180/207 (86%)

Query: 22  KPKVPFHIPTIRRPQDEYNILVNNTNMPFEHVWLQRSEDGDRFIHPLEKIFVLDFVDKDP 81
           KPKVPFH+ TI++PQ EYNI V+NTN+PF HVWL+ S    RFIHPLE + V+ FVD D 
Sbjct: 1   KPKVPFHVSTIKKPQHEYNIFVDNTNLPFNHVWLKWSHGEKRFIHPLESLSVMSFVDTDV 60

Query: 82  GDVLPKKPPPIESTPFKLVEEVKDLKDLAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQIS 141
           GDV+P K PPIESTPFKLVE V+DLK+LAAKL S DEFAVDLEHNQYR+FQGLTCLMQIS
Sbjct: 61  GDVVPVKAPPIESTPFKLVETVQDLKELAAKLHSADEFAVDLEHNQYRTFQGLTCLMQIS 120

Query: 142 TRTEDFVVDTLKLRIHIGPYLREVFKDPTKRKVMHGADRDILWLQRDFGIYICNLFDTGQ 201
           TRTEDF+VDTLKL   IGPYLREVFKDP+KRKVMHGAD D++WLQRDFGIYICNLFDT Q
Sbjct: 121 TRTEDFIVDTLKLHSSIGPYLREVFKDPSKRKVMHGADNDVVWLQRDFGIYICNLFDTHQ 180

Query: 202 ASKVLKLDRNSLEYLLHHFVEVTANKE 228
           ASKVLKL+R SLEYLL HF ++TANKE
Sbjct: 181 ASKVLKLERKSLEYLLCHFCDITANKE 207


>Glyma19g29260.1 
          Length = 327

 Score =  331 bits (848), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 156/210 (74%), Positives = 186/210 (88%), Gaps = 1/210 (0%)

Query: 20  GPKPKVPFHIPTIRRPQDEYNILVNNTNMPFEHVWLQRSEDGDRFIHPLEKIFVLDFVDK 79
           G  PKVPFHIPTI++PQ  YNI+V+N+N PFEH+ L++S+DG R+IHPLEK+ VLDFVDK
Sbjct: 105 GANPKVPFHIPTIKKPQYAYNIVVDNSNEPFEHILLEKSDDGQRYIHPLEKLSVLDFVDK 164

Query: 80  DP-GDVLPKKPPPIESTPFKLVEEVKDLKDLAAKLRSVDEFAVDLEHNQYRSFQGLTCLM 138
           +   +++P +PP IE TPFKLVE+VK LK++AA L SV+EFAVDLEHN YRSFQGLTCLM
Sbjct: 165 ENLENLVPVEPPSIECTPFKLVEDVKGLKEVAAMLSSVNEFAVDLEHNHYRSFQGLTCLM 224

Query: 139 QISTRTEDFVVDTLKLRIHIGPYLREVFKDPTKRKVMHGADRDILWLQRDFGIYICNLFD 198
           QISTRTEDFV+DTLK+R H+GPYLREVFKDPTK+KVMHGADRDI+WLQRDFGIY+CN+FD
Sbjct: 225 QISTRTEDFVIDTLKVRNHVGPYLREVFKDPTKKKVMHGADRDIVWLQRDFGIYVCNMFD 284

Query: 199 TGQASKVLKLDRNSLEYLLHHFVEVTANKE 228
           TGQ+S+VLKLDR SL+YLL  F  VTANKE
Sbjct: 285 TGQSSRVLKLDRYSLQYLLQQFCGVTANKE 314


>Glyma05g11190.1 
          Length = 230

 Score =  287 bits (734), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 143/182 (78%), Positives = 157/182 (86%), Gaps = 7/182 (3%)

Query: 50  FEHVWLQRSEDGDRFIHP---LEKIFVLDFVDKDPGDVLPKKPPPIESTPFKLVEEVKDL 106
           F++ WL      D FI      EK+ VLDFVD +  DV+P KPP IESTPFKLV+EVKDL
Sbjct: 7   FDYCWLC----WDVFILSSSLTEKLSVLDFVDTNLEDVVPVKPPSIESTPFKLVQEVKDL 62

Query: 107 KDLAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPYLREVF 166
           K+L AKLRSV+EFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPYLRE+F
Sbjct: 63  KELVAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPYLREIF 122

Query: 167 KDPTKRKVMHGADRDILWLQRDFGIYICNLFDTGQASKVLKLDRNSLEYLLHHFVEVTAN 226
           KDP KRKVMHGADRDI+WLQRDFGIYICNLFDT QASK+L L+RNSLE++LHHF EVTAN
Sbjct: 123 KDPAKRKVMHGADRDIVWLQRDFGIYICNLFDTHQASKLLNLERNSLEHILHHFCEVTAN 182

Query: 227 KE 228
           KE
Sbjct: 183 KE 184


>Glyma05g14390.1 
          Length = 247

 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 116/178 (65%), Positives = 134/178 (75%), Gaps = 18/178 (10%)

Query: 69  EKIFVLDFVDKDPGDVLPKKPPPIESTPFKLVEEVKDLKDLAAKLRSVDEFAVDLE---- 124
           E +FV+ FVD D GDV+P KPPPIESTPF+LVE V+DLK+LAAKL S DEFA+       
Sbjct: 1   ENLFVMSFVDIDVGDVVPVKPPPIESTPFRLVETVQDLKELAAKLHSTDEFALKTNITSL 60

Query: 125 --------------HNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPYLREVFKDPT 170
                         HNQYR+FQGLTCL QISTRT DF+V+TLKL   I PY +EVFKDP+
Sbjct: 61  CIKFYFELSFLTYYHNQYRTFQGLTCLKQISTRTADFIVNTLKLHSSIRPYFKEVFKDPS 120

Query: 171 KRKVMHGADRDILWLQRDFGIYICNLFDTGQASKVLKLDRNSLEYLLHHFVEVTANKE 228
           KRKVMHGAD D++WLQRDFGIYICNLFDT +A KVLKL+R SLEYLL +F  + ANKE
Sbjct: 121 KRKVMHGADNDVVWLQRDFGIYICNLFDTNEALKVLKLERKSLEYLLCYFCNIIANKE 178


>Glyma06g46220.1 
          Length = 840

 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/205 (38%), Positives = 111/205 (54%), Gaps = 6/205 (2%)

Query: 26  PFHIPTIRRPQDEY--NILVNNTNMPFEHVWLQRSEDGDRFIHPLEKIFVLDFVDKDPGD 83
           P ++ + ++PQ      ++ +N+  PF+H  L   ++     HP E        +  P  
Sbjct: 8   PCYLHSEQKPQCAAFKRVVADNSYTPFKH--LINDDENASNSHPYEAEITALLKNPLPEI 65

Query: 84  VLPKKPPPIE-STPFKLVEEVKDLKDLAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQIST 142
            L  +   +E    +  V     LK+L   L     FAVD E +  RSF G T L+QIST
Sbjct: 66  ELGTEIADLEMKDSYVWVHTEMQLKELVDVLSEERFFAVDTEQHSLRSFLGFTALVQIST 125

Query: 143 RTEDFVVDTLKLRIHIGPYLREVFKDPTKRKVMHGADRDILWLQRDFGIYICNLFDTGQA 202
           R +D++VDT+ L   +G  LR +F +P+  KV HGAD DI+WLQRDF IY+ NLFDT +A
Sbjct: 126 REKDYLVDTIALHDFMG-ILRPIFANPSICKVFHGADNDIVWLQRDFHIYVVNLFDTSKA 184

Query: 203 SKVLKLDRNSLEYLLHHFVEVTANK 227
            +VL   + SL YLL  +  VT NK
Sbjct: 185 CEVLSKPQKSLAYLLETYCGVTTNK 209


>Glyma12g10530.1 
          Length = 846

 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 83/133 (62%), Gaps = 11/133 (8%)

Query: 102 EVKDLKDLAAKLRSVDEFAVDLEHNQYRSFQGLTCLMQISTRTEDFVVDTLKLRIHIGPY 161
           E+ +L D+ ++ R    FAVD E +  RSF G T L+QISTR +D++VDT+ L   +G  
Sbjct: 107 ELNELIDVLSEERF---FAVDTEQHSLRSFLGFTTLVQISTREKDYLVDTIALHDFMG-I 162

Query: 162 LREVFKDPTKRKVMHGADRDILWLQRDFGIYICNLFDTGQ-------ASKVLKLDRNSLE 214
           LR VF +P+  KV HGAD DI+WLQRDF IY+ +LFD  Q       A +V+   + SL 
Sbjct: 163 LRPVFANPSICKVFHGADNDIVWLQRDFHIYVVSLFDILQRPCTGCHACEVMSKPQKSLA 222

Query: 215 YLLHHFVEVTANK 227
           YLL  +  VT NK
Sbjct: 223 YLLETYCGVTTNK 235