Miyakogusa Predicted Gene

Lj0g3v0101459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101459.1 Non Chatacterized Hit- tr|D8SK47|D8SK47_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.8,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL,CUFF.5697.1
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g33940.1                                                       299   2e-81
Glyma10g33660.1                                                       296   1e-80
Glyma10g33660.3                                                       270   9e-73
Glyma10g33660.2                                                       211   7e-55

>Glyma20g33940.1 
          Length = 587

 Score =  299 bits (766), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 166/268 (61%), Positives = 190/268 (70%), Gaps = 38/268 (14%)

Query: 1   MEADQGDDYTHLPDHRIFRDGSKEIPEAQHPLCRRTLLQDLNRQGAVVLEGRTLDIMETE 60
           MEADQGDDYTHLPDH IFRDGSK+I EAQ+ L +RTLLQDLNRQGAVVLEG+TLD ME E
Sbjct: 284 MEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLD-MEME 342

Query: 61  Y-----------IHESDGVREEARRNRISTMTQIEDLQAQDDHPFAPLCIKDPRDYFGSQ 109
           +             E DGV +E R+NRIS MT I+DLQAQD+HP+APLCIKDPRDYF  Q
Sbjct: 343 HPRTVAEILARRKQECDGVVDEERQNRISKMTLIDDLQAQDNHPYAPLCIKDPRDYFDFQ 402

Query: 110 QANG----------------SLGSDEEAYGYLRASISKIKAKGLKDPLLSSEIAL---NG 150
           QAN                 SLGS EEAYG LRASISKIK  GL+DPL S ++AL   NG
Sbjct: 403 QANAVKTLDDSQTGMEQMKCSLGS-EEAYGSLRASISKIKTTGLRDPLFSPDVALKVLNG 461

Query: 151 LMTKNVXXXXXXXXXXXXXXXQEISDHDSLPSTMRDELLDHLRCSQELLRHFWSSYPITT 210
           L TKN+                +I     LP+T ++ LLDH  CSQELLRHFWSSYPITT
Sbjct: 462 L-TKNISSPKYHLGRSSQGSVLDI-----LPNTTKETLLDHWVCSQELLRHFWSSYPITT 515

Query: 211 RHLINKTRRLKEAISQLYSKLEEIKVSA 238
           ++L+NKTRRLKE+ISQ+YSKLE+IKVSA
Sbjct: 516 QNLVNKTRRLKESISQIYSKLEDIKVSA 543


>Glyma10g33660.1 
          Length = 587

 Score =  296 bits (758), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 163/268 (60%), Positives = 191/268 (71%), Gaps = 38/268 (14%)

Query: 1   MEADQGDDYTHLPDHRIFRDGSKEIPEAQHPLCRRTLLQDLNRQGAVVLEGRTLDIMETE 60
           MEADQGDDYTHLPDH IFRDGSK+I EAQ+ L +RTLLQDLNRQGAVVLEG+TLD ME E
Sbjct: 284 MEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLD-MEME 342

Query: 61  Y-----------IHESDGVREEARRNRISTMTQIEDLQAQDDHPFAPLCIKDPRDYFGSQ 109
           +             E DGV +E RRNRIS MT IEDLQAQD+HP+APLCIKDPRDYF SQ
Sbjct: 343 HPRTVAEILARRKQECDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQ 402

Query: 110 QANG----------------SLGSDEEAYGYLRASISKIKAKGLKDPLLSSEIA---LNG 150
           QAN                 SLGS EEAY  LRASISKIK  GL+DPL S ++A   LNG
Sbjct: 403 QANAVKTLDDSQAGMEQMKCSLGS-EEAYDSLRASISKIKTTGLRDPLFSPDVALKVLNG 461

Query: 151 LMTKNVXXXXXXXXXXXXXXXQEISDHDSLPSTMRDELLDHLRCSQELLRHFWSSYPITT 210
           L TKN+                +I     LP++ +++LLDH  CSQELLRHFWSSYP++T
Sbjct: 462 L-TKNITSTKYHLGKSSQESVLDI-----LPNSTKEKLLDHWVCSQELLRHFWSSYPVST 515

Query: 211 RHLINKTRRLKEAISQLYSKLEEIKVSA 238
           ++L++KTRRLK++ISQ+YSKLE+IKVSA
Sbjct: 516 QNLVSKTRRLKDSISQIYSKLEDIKVSA 543


>Glyma10g33660.3 
          Length = 549

 Score =  270 bits (690), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 151/265 (56%), Positives = 172/265 (64%), Gaps = 70/265 (26%)

Query: 1   MEADQGDDYTHLPDHRIFRDGSKEIPEAQHPLCRRTLLQDLNRQGAVVLEGRTLDIMETE 60
           MEADQGDDYTHLPDH IFRDGSK+I EAQ+ L +RTLLQDLNRQGAVVLEG+TLD ME E
Sbjct: 284 MEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLD-MEME 342

Query: 61  Y-----------IHESDGVREEARRNRISTMTQIEDLQAQDDHPFAPLCIKDPRDYFGSQ 109
           +             E DGV +E RRNRIS MT IEDLQAQD+HP+APLCIKDPRDYF SQ
Sbjct: 343 HPRTVAEILARRKQECDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQ 402

Query: 110 QANG----------------SLGSDEEAYGYLRASISKIKAKGLKDPLLSSEIALNGLMT 153
           QAN                 SLGS EEAY  LRASISKIK  GL+DPL S ++AL     
Sbjct: 403 QANAVKTLDDSQAGMEQMKCSLGS-EEAYDSLRASISKIKTTGLRDPLFSPDVALK---- 457

Query: 154 KNVXXXXXXXXXXXXXXXQEISDHDSLPSTMRDELLDHLRCSQELLRHFWSSYPITTRHL 213
                                                H  CSQELLRHFWSSYP++T++L
Sbjct: 458 -------------------------------------HWVCSQELLRHFWSSYPVSTQNL 480

Query: 214 INKTRRLKEAISQLYSKLEEIKVSA 238
           ++KTRRLK++ISQ+YSKLE+IKVSA
Sbjct: 481 VSKTRRLKDSISQIYSKLEDIKVSA 505


>Glyma10g33660.2 
          Length = 523

 Score =  211 bits (536), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 115/175 (65%), Positives = 126/175 (72%), Gaps = 29/175 (16%)

Query: 1   MEADQGDDYTHLPDHRIFRDGSKEIPEAQHPLCRRTLLQDLNRQGAVVLEGRTLDIMETE 60
           MEADQGDDYTHLPDH IFRDGSK+I EAQ+ L +RTLLQDLNRQGAVVLEG+TLD ME E
Sbjct: 284 MEADQGDDYTHLPDHGIFRDGSKDISEAQNSLYKRTLLQDLNRQGAVVLEGKTLD-MEME 342

Query: 61  Y-----------IHESDGVREEARRNRISTMTQIEDLQAQDDHPFAPLCIKDPRDYFGSQ 109
           +             E DGV +E RRNRIS MT IEDLQAQD+HP+APLCIKDPRDYF SQ
Sbjct: 343 HPRTVAEILARRKQECDGVVDEERRNRISKMTPIEDLQAQDNHPYAPLCIKDPRDYFDSQ 402

Query: 110 QANG----------------SLGSDEEAYGYLRASISKIKAKGLKDPLLSSEIAL 148
           QAN                 SLGS EEAY  LRASISKIK  GL+DPL S ++AL
Sbjct: 403 QANAVKTLDDSQAGMEQMKCSLGS-EEAYDSLRASISKIKTTGLRDPLFSPDVAL 456