Miyakogusa Predicted Gene

Lj0g3v0101279.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101279.1 Non Chatacterized Hit- tr|C5WXC0|C5WXC0_SORBI
Putative uncharacterized protein Sb01g018340
OS=Sorghu,42.59,2e-16,seg,NULL; Katanin_con80,NULL; KATANIN P80
SUBUNIT,Katanin p80 subunit B1,CUFF.5682.1
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g31790.1                                                       276   5e-75
Glyma13g31790.2                                                       273   5e-74
Glyma15g07510.1                                                       273   5e-74
Glyma13g25350.1                                                       265   2e-71
Glyma07g31130.1                                                       189   1e-48
Glyma07g31130.2                                                       156   7e-39
Glyma05g09330.1                                                       130   4e-31
Glyma19g00890.1                                                       127   5e-30

>Glyma13g31790.1 
          Length = 824

 Score =  276 bits (707), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 131/163 (80%), Positives = 141/163 (86%)

Query: 1   MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGAINALRKLPDQSVQADVISVLVEKMEIL 60
           MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGA NALRKLPD SVQADVISVLVE+MEI 
Sbjct: 662 MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGATNALRKLPDHSVQADVISVLVERMEIF 721

Query: 61  SLDLFSCLFPVLTGLLDSRTERHXXXXXXXXXXXXXXFGPTIRATVSAPPSVGVDLHQEQ 120
           +LDLFSCL PVLTGLLDS+ ERH              FGPT+ ATVSAPPSVGVDLHQE+
Sbjct: 722 TLDLFSCLLPVLTGLLDSKIERHVKVSLDMLLKVVAVFGPTVLATVSAPPSVGVDLHQEE 781

Query: 121 RRECCNQCFMQLQKTQMVLPILIRRGGLLAKSALELNLVLQQS 163
           RRECCN+CFM+LQK QM LPILIR+GG+LA+SALELNLVLQQS
Sbjct: 782 RRECCNKCFMELQKIQMTLPILIRKGGILARSALELNLVLQQS 824


>Glyma13g31790.2 
          Length = 560

 Score =  273 bits (699), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 131/163 (80%), Positives = 141/163 (86%)

Query: 1   MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGAINALRKLPDQSVQADVISVLVEKMEIL 60
           MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGA NALRKLPD SVQADVISVLVE+MEI 
Sbjct: 398 MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGATNALRKLPDHSVQADVISVLVERMEIF 457

Query: 61  SLDLFSCLFPVLTGLLDSRTERHXXXXXXXXXXXXXXFGPTIRATVSAPPSVGVDLHQEQ 120
           +LDLFSCL PVLTGLLDS+ ERH              FGPT+ ATVSAPPSVGVDLHQE+
Sbjct: 458 TLDLFSCLLPVLTGLLDSKIERHVKVSLDMLLKVVAVFGPTVLATVSAPPSVGVDLHQEE 517

Query: 121 RRECCNQCFMQLQKTQMVLPILIRRGGLLAKSALELNLVLQQS 163
           RRECCN+CFM+LQK QM LPILIR+GG+LA+SALELNLVLQQS
Sbjct: 518 RRECCNKCFMELQKIQMTLPILIRKGGILARSALELNLVLQQS 560


>Glyma15g07510.1 
          Length = 807

 Score =  273 bits (698), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 133/163 (81%), Positives = 141/163 (86%)

Query: 1   MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGAINALRKLPDQSVQADVISVLVEKMEIL 60
           MQTHD TLSNLRSRLTKLQVVRHFWE NDIKGA NALRKLPDQSVQADVISVLVEKMEI 
Sbjct: 645 MQTHDVTLSNLRSRLTKLQVVRHFWECNDIKGATNALRKLPDQSVQADVISVLVEKMEIF 704

Query: 61  SLDLFSCLFPVLTGLLDSRTERHXXXXXXXXXXXXXXFGPTIRATVSAPPSVGVDLHQEQ 120
           +LDLFSCL PVLTGLLDS+ ERH              FGPTIRATVSAPPSVGVDLHQE+
Sbjct: 705 TLDLFSCLLPVLTGLLDSKIERHVKLSLDMLLKLVAVFGPTIRATVSAPPSVGVDLHQEE 764

Query: 121 RRECCNQCFMQLQKTQMVLPILIRRGGLLAKSALELNLVLQQS 163
           RRECCN+CFM+LQK QM LPILIR+GG+LA+SALELNLVLQQS
Sbjct: 765 RRECCNKCFMELQKIQMTLPILIRKGGILARSALELNLVLQQS 807


>Glyma13g25350.1 
          Length = 819

 Score =  265 bits (677), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 128/162 (79%), Positives = 139/162 (85%)

Query: 1   MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGAINALRKLPDQSVQADVISVLVEKMEIL 60
           MQTHD TLSNLRSRLTKLQVV+HFWERND KGAI+ALRKLPDQSVQADVISVLV+KMEI+
Sbjct: 657 MQTHDVTLSNLRSRLTKLQVVQHFWERNDTKGAISALRKLPDQSVQADVISVLVDKMEII 716

Query: 61  SLDLFSCLFPVLTGLLDSRTERHXXXXXXXXXXXXXXFGPTIRATVSAPPSVGVDLHQEQ 120
           +LDLFSCL PVLTGLLDS  ERH              FGPTIR+T+SAPPSVG+DLH EQ
Sbjct: 717 TLDLFSCLLPVLTGLLDSNIERHVKVSLDMLLKLVAVFGPTIRSTISAPPSVGIDLHAEQ 776

Query: 121 RRECCNQCFMQLQKTQMVLPILIRRGGLLAKSALELNLVLQQ 162
           RREC NQCFMQLQK +M+LPILIRRGG+LAKSA ELNLVLQQ
Sbjct: 777 RRECSNQCFMQLQKIRMILPILIRRGGILAKSAQELNLVLQQ 818


>Glyma07g31130.1 
          Length = 773

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/121 (76%), Positives = 99/121 (81%)

Query: 1   MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGAINALRKLPDQSVQADVISVLVEKMEIL 60
           MQTHD TLSNLRSRLTKLQVVRHFWE+ND K AI+ALRKLPD SVQADVISVLVEKMEIL
Sbjct: 593 MQTHDVTLSNLRSRLTKLQVVRHFWEQNDTKSAISALRKLPDLSVQADVISVLVEKMEIL 652

Query: 61  SLDLFSCLFPVLTGLLDSRTERHXXXXXXXXXXXXXXFGPTIRATVSAPPSVGVDLHQEQ 120
           +LDLFSCL PVLTGLLDS  ERH              FGPT+R+T+SAPPSVGVDLH EQ
Sbjct: 653 TLDLFSCLLPVLTGLLDSNIERHVKVSLDMLLKLVAVFGPTVRSTISAPPSVGVDLHAEQ 712

Query: 121 R 121
           R
Sbjct: 713 R 713


>Glyma07g31130.2 
          Length = 644

 Score =  156 bits (395), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 77/101 (76%), Positives = 80/101 (79%)

Query: 1   MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGAINALRKLPDQSVQADVISVLVEKMEIL 60
           MQTHD TLSNLRSRLTKLQVVRHFWE+ND K AI+ALRKLPD SVQADVISVLVEKMEIL
Sbjct: 544 MQTHDVTLSNLRSRLTKLQVVRHFWEQNDTKSAISALRKLPDLSVQADVISVLVEKMEIL 603

Query: 61  SLDLFSCLFPVLTGLLDSRTERHXXXXXXXXXXXXXXFGPT 101
           +LDLFSCL PVLTGLLDS  ERH              FGPT
Sbjct: 604 TLDLFSCLLPVLTGLLDSNIERHVKVSLDMLLKLVAVFGPT 644


>Glyma05g09330.1 
          Length = 249

 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/161 (46%), Positives = 102/161 (63%)

Query: 1   MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGAINALRKLPDQSVQADVISVLVEKMEIL 60
           M+ HD  LS++ +R  KLQ+V   WERND+K  I  + K+ D +V ADV+S+++EK++I+
Sbjct: 86  MEQHDEFLSSMLARSAKLQMVFRCWERNDVKEVIGIMAKMDDHAVIADVVSIIMEKIDII 145

Query: 61  SLDLFSCLFPVLTGLLDSRTERHXXXXXXXXXXXXXXFGPTIRATVSAPPSVGVDLHQEQ 120
           +L++ + L P+LT LL S  ERH              FG  I +TVSA   VGVD+  E 
Sbjct: 146 TLEICAGLLPLLTDLLQSEMERHLGISLEMLLKLVRIFGSVIYSTVSATQPVGVDIEAEN 205

Query: 121 RRECCNQCFMQLQKTQMVLPILIRRGGLLAKSALELNLVLQ 161
           R E CN CF +L+K +  LP L RRGG +AKSA ELNL LQ
Sbjct: 206 RLERCNLCFTELEKVKRFLPSLSRRGGSIAKSAQELNLALQ 246


>Glyma19g00890.1 
          Length = 788

 Score =  127 bits (319), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 102/162 (62%)

Query: 1   MQTHDATLSNLRSRLTKLQVVRHFWERNDIKGAINALRKLPDQSVQADVISVLVEKMEIL 60
           M+ HD  LS++ +R  KLQ+V   WERND+K  I  + ++ D +V ADV+S+++EK++I+
Sbjct: 625 MEQHDEFLSSMLARSAKLQMVFRCWERNDVKEVIGIMARMDDHAVIADVVSIIMEKIDII 684

Query: 61  SLDLFSCLFPVLTGLLDSRTERHXXXXXXXXXXXXXXFGPTIRATVSAPPSVGVDLHQEQ 120
           +L++ + L P+LT LL S  ERH              FG  I +TVSA   VGVD+  E 
Sbjct: 685 TLEICAGLLPLLTDLLQSEMERHLGISLEMLLKLVRIFGSVIYSTVSATQPVGVDIEAEN 744

Query: 121 RRECCNQCFMQLQKTQMVLPILIRRGGLLAKSALELNLVLQQ 162
           R E CN CF +L+K +  LP L RRGG +AKSA ELNL LQ 
Sbjct: 745 RLERCNLCFTELEKVKRFLPSLSRRGGSIAKSAQELNLALQD 786