Miyakogusa Predicted Gene

Lj0g3v0101239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101239.1 Non Chatacterized Hit- tr|I0YU80|I0YU80_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,30.22,0.0000001,no description,Six-bladed beta-propeller,
TolB-like; YWTD domain,NULL,CUFF.5678.1
         (405 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g30400.1                                                       622   e-178
Glyma19g22830.1                                                        53   7e-07
Glyma19g41590.1                                                        52   1e-06

>Glyma19g30400.1 
          Length = 728

 Score =  622 bits (1604), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 316/421 (75%), Positives = 347/421 (82%), Gaps = 19/421 (4%)

Query: 1   MDCIGSSPGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETLFP 60
           +DCIGSSPGFEDG FESAKLRRPAGSYYHA+EDCLYFVDSEN+AIRKADMGARTVETL+P
Sbjct: 251 LDCIGSSPGFEDGDFESAKLRRPAGSYYHATEDCLYFVDSENNAIRKADMGARTVETLYP 310

Query: 61  ASVTSKGG-GVWNWIMNKLGLESSEETNVEERSEVFDSKSLYFPWHLLKSVDDTLYIIDR 119
            S  +KGG  +WNWIM+KLGLESS +T+V+ERSEVFDSK LYFPWHLLKS DDT YI+DR
Sbjct: 311 TSAPNKGGIQIWNWIMSKLGLESSGKTSVQERSEVFDSK-LYFPWHLLKSPDDTFYIMDR 369

Query: 120 RFQTLWTMDFSSGKINEVLEGS-RILEICGQPIMKNLSILDQIPCDWFPKKPDNGNLLEG 178
           RFQTLW MD +SGKI+EV EGS RIL+ICGQ IMK+LSI+DQIP DWF ++  NG LL G
Sbjct: 370 RFQTLWVMDINSGKIDEVFEGSPRILKICGQLIMKSLSIIDQIPSDWFQQQTKNGFLLGG 429

Query: 179 IPRSDLLSSLTTLQNHIFICD--------------TVGQRIVKVNEESKVCVNFQLCNLG 224
           +  SDLLSSL TL NHIFICD               VGQRI+KVN ES VC NF L NLG
Sbjct: 430 LQHSDLLSSLATLHNHIFICDPGILFPLLINAFLLCVGQRILKVNRESGVCSNFWLSNLG 489

Query: 225 ILGLPYWLNSPLETYYAVGNGLLGTAIDHIQHFDFLPGKIDIQLSVNVPLDIELVEPLQE 284
           ILGLPYWLN PLET+YAV NGL GT IDH+QHFD LPG+IDI L V++P+DIELV PLQE
Sbjct: 490 ILGLPYWLNFPLETFYAVANGLSGTPIDHLQHFDLLPGRIDINLRVDLPMDIELVVPLQE 549

Query: 285 SCIWRQARGAATEISGMDDVPGSLEKVGAAQQWYDELDYLAAPKPESEMTVDVDNLDKKS 344
           SCIW QARGAATE SGMD+V  SL K G AQQWYDELD LAAPKPESE+ V  DNLDKKS
Sbjct: 550 SCIWYQARGAATETSGMDEV--SLNKSGLAQQWYDELDDLAAPKPESEINVQDDNLDKKS 607

Query: 345 VVEDEGVRISCGVCTSPGTSEVIVYAVLYCKLRRDPNSNDGNRVKHAARILDILSSKRSG 404
           VVEDE V  S GV TSPGTSEVI+YA LYCKLR  P SN+GNR +HAARILDILSSKRSG
Sbjct: 608 VVEDEKVPFSVGVFTSPGTSEVIIYAALYCKLRSVPKSNEGNREEHAARILDILSSKRSG 667

Query: 405 K 405
           K
Sbjct: 668 K 668


>Glyma19g22830.1 
          Length = 70

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/31 (80%), Positives = 27/31 (87%)

Query: 375 KLRRDPNSNDGNRVKHAARILDILSSKRSGK 405
           KLR  P SN+GNR +HAARILDILSSKRSGK
Sbjct: 1   KLRSVPKSNEGNREEHAARILDILSSKRSGK 31


>Glyma19g41590.1 
          Length = 1083

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 4   IGSS--PGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETL 58
           IGSS   G +DG F+ A   RP G  Y+A ++ LY  D+ENHA+R+ D     V TL
Sbjct: 635 IGSSGEEGLQDGSFDDATFNRPQGLAYNAKKNILYVADTENHALREIDFVNEKVRTL 691