Miyakogusa Predicted Gene

Lj0g3v0101189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101189.1 tr|B9GFW3|B9GFW3_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_752856 PE=4
SV=1,27.83,4e-18,seg,NULL; coiled-coil,NULL,CUFF.5673.1
         (1084 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g06840.1                                                       783   0.0  
Glyma13g11470.1                                                       327   3e-89
Glyma13g11430.1                                                        75   5e-13
Glyma08g20790.1                                                        68   6e-11
Glyma13g11420.1                                                        63   2e-09
Glyma20g06830.1                                                        52   3e-06

>Glyma20g06840.1 
          Length = 1555

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/973 (49%), Positives = 593/973 (60%), Gaps = 124/973 (12%)

Query: 170  PVRKQLDFAKANRGTPKKMDEGNQLNFSAQYELGYNVGQKNEGNPTDQGQVSDSNQKSNQ 229
            PV +QLDF   NRGTP ++DE                         D+G VSD++ KS+Q
Sbjct: 2    PVCRQLDFDNGNRGTPLRVDE-------------------------DKGMVSDTDHKSDQ 36

Query: 230  VNGNSIHRFTPLSYSAKTQLFMGSPDSSRYTGHRTPPSKQYRSFVPDVYVTQGAALSSIR 289
            V  N IHRFTPLS S + QL M SPDSSR+ G+ T P  Q   FVP+V+V  GA  SS+ 
Sbjct: 37   VIQNPIHRFTPLSLSGRKQLVMRSPDSSRHDGNITQPLVQSGLFVPEVHVAHGATPSSVH 96

Query: 290  KSISKLNTLETTPNTSTLKEGIDKLKYRLSKYSPGTSLFSEKDCEYKQVETLTAPFEKQP 349
             SI K+ TLE TP  S LKEG+D+LK RLSK+SPG SL ++K CEYK  ET   P  ++ 
Sbjct: 97   ISILKMKTLEATPAISVLKEGMDRLKARLSKFSPGFSLSNKKYCEYKHDETRQTPLGEKL 156

Query: 350  FSFTPEKNIHQGLITNENHGNSSFKNISKSSPNQETVTSKKDGENFNLIAADVSYNDENI 409
            FS TP+ N+++GL+    HG  S KNI KSS N+ET+ +K D EN +LI+A VSYNDEN 
Sbjct: 157  FSLTPDSNVYKGLVDGNEHGIQSNKNICKSSQNEETLDAKIDEENLSLISAHVSYNDENP 216

Query: 410  KPVEMASSPLRKTRLTEVVGLDLEDSTVEKRKDEIPIVTHDKPFSSPVKPFVQNPSPSLE 469
            K VEM +SP + T LT+VV +DL D TVEK KDEI + +      +P    +Q+P PS++
Sbjct: 217  KVVEMGASPSQMTHLTKVVDVDLADRTVEKGKDEILVPSPPIQEVTPQLCSLQDP-PSMQ 275

Query: 470  ----RQNI-CHG-----------ESKQLDKQNESVNSGSLQAIEYNVQTVANKLDLSDFR 513
                + N+  HG               L K   S++SG       N+Q ++ K +L    
Sbjct: 276  DLSPKGNLDGHGLDNSYHSVLQVAQSHLTKSGISISSGKKLQDSPNMQNLSPKSNLDGHD 335

Query: 514  NREQT-----NSPFEKVNEFTKIASKSKPVESPD--RIIVPSTTIQEATAQSPFLALQEA 566
            N   +      SP  K      I+S  K  +SP+   +   S         S    LQ A
Sbjct: 336  NSYHSVLQVAQSPLTKSG--ISISSGKKLQDSPNMQNLSTKSNLYGHGLDNSYHSVLQVA 393

Query: 567  PGELIQS--------------NIQDLSHKGNSDGLGCDLDNNYHVVLQVDQSPLPKSGIE 612
               L +S              N+QDLS K N DG G  L N+YH  LQV QSPL KSGI 
Sbjct: 394  QSPLTKSGISISSGKKLQDSPNVQDLSPKSNLDGHG--LHNSYHSALQVAQSPLTKSGIN 451

Query: 613  VSSGKKRKGSKILSDGENIDKIGRIEGSSEVHESWNGNELLVSEQMSPMRSEREKLGDQM 672
            +SSGKKRKG +I S+G+NIDKIGRI  S EVH+S NG+  L+SEQ+  MRSEREKLGDQ 
Sbjct: 452  ISSGKKRKGVEIRSNGDNIDKIGRIGRSPEVHKSGNGDLQLLSEQIGSMRSEREKLGDQT 511

Query: 673  QSDQH-TLKKFSVSTKQLLSPSVDKLNLRLISKLEDILVHLQKAKKWDILCSEIQSQKST 731
             +D    LKKF   T QLL PSVDKLNLR                          S K T
Sbjct: 512  LNDGDLILKKFLARTNQLLPPSVDKLNLR--------------------------SLKIT 545

Query: 732  DPLNIPGQRRIVETRMLLINIAYEKAKLQLMHMKRERLTKKLQQLSSGLQEAQMMK-NVI 790
            DPLNI   +R+ ETR LL +IAYEKAKLQL+H+K ++L KK+QQ+SSGLQE + +K N I
Sbjct: 546  DPLNILRDKRVAETRTLLYDIAYEKAKLQLLHVKHDKLQKKVQQVSSGLQECETIKLNSI 605

Query: 791  PCSTKIGSINIRADDSHTQ----VSSE--MEKRLELESLDWKAKSLIEFFYNNCKMEGDR 844
            P S+K G+++ +ADDS  Q    VSS+  +EK+ ELE L+ KAKS  EF +++C MEG +
Sbjct: 606  PSSSKSGAMDTQADDSRWQGKCRVSSQKVLEKKQELEILESKAKSWSEFLHSHCMMEGYQ 665

Query: 845  TCSDTIKSVHDYLLKRMSYKCIFQNLKLWNIEDFERKDGCFKILLNYCDYITQRFTXXXX 904
            + ++TIK+V  YL +R S K I QNLKLW IEDFERKDGC+K+ LNYC Y+TQRFT    
Sbjct: 666  SYTNTIKAVSGYLQQRKSCKSIRQNLKLWEIEDFERKDGCYKVCLNYCGYLTQRFTVNTG 725

Query: 905  XXXXXXXXXXXXXXXRKTFPNMDAFSAFLFVLNPHTNKKCPGQISLAQETQ--------- 955
                            KTFPN+D  SAF+FVL+PHT KKC G   +A+ETQ         
Sbjct: 726  QSSIIISNSLNDVNIGKTFPNLDGISAFVFVLHPHTTKKCTGSSIMARETQDSNQNDTWQ 785

Query: 956  -------------ITSSLISNLLYVAEEVQLAQIEIRNLVHAKFYSRSVHQLDLQLLFID 1002
                         ITSSL+SNLL V EEVQ AQIE RNLV AKFYS SV  LDLQL FID
Sbjct: 786  QQIGEKDHEITWGITSSLVSNLLDVVEEVQSAQIEFRNLVAAKFYSHSVQCLDLQLSFID 845

Query: 1003 FCSGKKVQVTLDMTCLKCGAYPVEVLPCQIHDPSASGEQKPLPASLVDKITTAAVNERVG 1062
            FCSG++V+VT D+TCLKCG YP EVLP QIHDPS SGEQK LP+SL+D+I TAA + RVG
Sbjct: 846  FCSGRRVEVTFDITCLKCGVYPAEVLPSQIHDPS-SGEQKSLPSSLLDEIRTAAESVRVG 904

Query: 1063 FSRIIRLCKCISK 1075
            +SRIIRLC+CIS+
Sbjct: 905  YSRIIRLCRCISQ 917


>Glyma13g11470.1 
          Length = 244

 Score =  327 bits (839), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 163/244 (66%), Positives = 187/244 (76%), Gaps = 1/244 (0%)

Query: 840  MEGDRTCSDTIKSVHDYLLKRMSYKCIFQNLKLWNIEDFERKDGCFKILLNYCDYITQRF 899
            MEGD++ ++TIK+V  YL KRM  K I QNLKLW IEDFE KDGC+K+ LNYC Y+TQRF
Sbjct: 1    MEGDQSYTNTIKAVSGYLQKRMPCKSICQNLKLWEIEDFECKDGCYKVCLNYCGYVTQRF 60

Query: 900  TXXXXXXXXXXXXXXXXXXXRKTFPNMDAFSAFLFVLNPHTNKKCPGQISLAQETQITSS 959
            T                    KTFPN+DA SAFLFVLNPHT KKC G   +A+ETQITSS
Sbjct: 61   TVNTGQSSIIISNNLNDVNIGKTFPNLDAVSAFLFVLNPHTTKKCSGSSIMARETQITSS 120

Query: 960  LISNLLYVAEEVQLAQIEIRNLVHAKFYSRSVHQLDLQLLFIDFCSGKKVQVTLDMTCLK 1019
            L+SNLL V EEVQ AQIEIRNLV AKFYS SV +LDLQL FIDFCSG+KV+VT D+TCLK
Sbjct: 121  LLSNLLDVVEEVQSAQIEIRNLVGAKFYSHSVQRLDLQLSFIDFCSGRKVKVTFDITCLK 180

Query: 1020 CGAYPVEVLPCQIHDPSASGEQKPLPASLVDKITTAAVNERVGFSRIIRLCKCISKAVQD 1079
            CG YP EVLP QI DPS SGEQK LP+SLVD++ TAA + RVG+SRIIRLC+CIS+ VQ 
Sbjct: 181  CGVYPAEVLPSQILDPS-SGEQKSLPSSLVDELRTAAESVRVGYSRIIRLCRCISQVVQA 239

Query: 1080 STQS 1083
            ST+S
Sbjct: 240  STKS 243


>Glyma13g11430.1 
          Length = 100

 Score = 74.7 bits (182), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 25/105 (23%)

Query: 169 APVRKQLDFAKANRGTPKKMDEGNQLNFSAQYELGYNVGQKNEGNPTDQGQVSDSNQKSN 228
            PV +QL+F  ANRGTP ++DE                         D+G VSD++ KS+
Sbjct: 21  VPVCRQLNFENANRGTPLRVDE-------------------------DKGTVSDTDHKSD 55

Query: 229 QVNGNSIHRFTPLSYSAKTQLFMGSPDSSRYTGHRTPPSKQYRSF 273
           QVN N IH  TP+S S +  L M SPDSSR+ G+ T P  Q  +F
Sbjct: 56  QVNQNPIHGSTPVSLSGRKLLVMRSPDSSRHAGNITQPLVQSEAF 100


>Glyma08g20790.1 
          Length = 94

 Score = 67.8 bits (164), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 11/97 (11%)

Query: 1  MDSTAFSIHYRSLARSESGDLKTPTRFGLLXXXXXXXXXXXXXXXXLMDLTNPEKTQS-L 59
          MDST FS+HYRSLARS+SG+++T  +FGL                  M+LT  ++     
Sbjct: 1  MDSTVFSLHYRSLARSDSGNIQT-RQFGL---------TSPSSQESFMELTEAKRIYGEA 50

Query: 60 VSATESGGGDSNDMSLVEEHPKSYNFGRLSPRLLAIL 96
          V   E+ G DSNDMS+  EH K + F R+SP   AI 
Sbjct: 51 VLDAENAGRDSNDMSIEGEHQKKHRFDRVSPAFEAIF 87


>Glyma13g11420.1 
          Length = 304

 Score = 62.8 bits (151), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 10/91 (10%)

Query: 1   MDSTAFSIHYRSLARSESGDLKTPTRFGLLXXXXXXXXXXXXXXXXLMDLTNPEKTQS-L 59
           MDSTAFS+HYRSLARS+SGD+KT    G+                  M+LT  +K    +
Sbjct: 140 MDSTAFSLHYRSLARSDSGDIKTRQFAGI---------TTPSSQGSYMELTEAKKRPGQV 190

Query: 60  VSATESGGGDSNDMSLVEEHPKSYNFGRLSP 90
           V   +S G DSNDMS+  +H  S+ +  LSP
Sbjct: 191 VLDADSAGRDSNDMSIDGDHQMSFGYDILSP 221


>Glyma20g06830.1 
          Length = 312

 Score = 52.4 bits (124), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/93 (39%), Positives = 48/93 (51%), Gaps = 14/93 (15%)

Query: 1   MDSTAFSIHYRSLARSESGDLKTP--TRFGLLXXXXXXXXXXXXXXXXLMDLTNPEKTQS 58
           MDSTAFS+HY+SLA S+SGD+KT    R G                   M+LT   K  +
Sbjct: 179 MDSTAFSLHYQSLAGSDSGDIKTRQFVRLG-----------TPSSQGSYMELTEATKRPA 227

Query: 59  -LVSATESGGGDSNDMSLVEEHPKSYNFGRLSP 90
            +V    S G DSNDMS+  +H  S+ +   SP
Sbjct: 228 EVVLDANSAGKDSNDMSIEVDHQMSFGYDIPSP 260