Miyakogusa Predicted Gene

Lj0g3v0100539.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100539.1 tr|B7U9S1|B7U9S1_CARAS AT5G10210-like protein
OS=Cardaminopsis arenosa PE=4 SV=1,35.2,7e-18,C2,C2 calcium-dependent
membrane targeting; no description,NULL; Protein kinase C conserved
region,C,CUFF.5625.1
         (197 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g02090.1                                                       223   1e-58
Glyma11g38150.1                                                       221   5e-58

>Glyma18g02090.1 
          Length = 197

 Score =  223 bits (568), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/203 (61%), Positives = 144/203 (70%), Gaps = 18/203 (8%)

Query: 2   ELPSFSFEIRIIQAQNV---GITKNLFARLYLPAGNNRSSIQLNSKMVSSKSN--PCWNE 56
           +LPSFS E+RIIQAQNV     TKNLF RLYLPAG+N+  IQLN+K VSS +   P WNE
Sbjct: 6   KLPSFSCELRIIQAQNVESIKSTKNLFTRLYLPAGSNKR-IQLNTKKVSSNTKYVPFWNE 64

Query: 57  SFSLDCSCSEEFLETLQKESLVLELRQSSAATKVLRRIFGGSRLVGKCEIPWKAILESQN 116
           SF+L+CSC +EFLE L+KESLV+ELRQS            GS +VGK EIPWKAI ES N
Sbjct: 65  SFNLNCSCPQEFLEGLKKESLVVELRQSK---------IWGSHVVGKGEIPWKAIFESPN 115

Query: 117 MEFKEWVKIDSCDGDS--STTFSVPEVQVEIKIKVVASEKKDNSSKRLNKWDECGCKQGH 174
           MEFKEWVK+D   G       F  P+VQVEIKI+V   E  +   +  N+WDECGCKQGH
Sbjct: 116 MEFKEWVKMDLVSGIDCEDVMFKAPQVQVEIKIQV-EKENNNRRKRLNNRWDECGCKQGH 174

Query: 175 DHHAWCSAEDYHVFSFGAALEAF 197
           D HAWCSAEDY +F+ GA LEAF
Sbjct: 175 DQHAWCSAEDYDIFALGAVLEAF 197


>Glyma11g38150.1 
          Length = 200

 Score =  221 bits (562), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/205 (62%), Positives = 147/205 (71%), Gaps = 19/205 (9%)

Query: 2   ELPSFSFEIRIIQAQNV---GITKNLFARLYLPAGNNRSSIQLNSKMVSSKSN--PCWNE 56
           +LPSFS E+RIIQAQNV     TKNLF RLYLPAGNN+  IQLN+K VSS +   P WNE
Sbjct: 6   KLPSFSCELRIIQAQNVESIKTTKNLFTRLYLPAGNNKR-IQLNTKKVSSNTQCVPFWNE 64

Query: 57  SFSLDCSCSEEFLETLQKESLVLELRQSSAATKVLRRIFGGSRLVGKCEIPWKAILESQN 116
           SF+LDCSC +EFLE+L+KESLVLELRQ+    K+ R     S LVGK EIPWKAILES  
Sbjct: 65  SFNLDCSCPQEFLESLKKESLVLELRQN----KIFR-----SHLVGKGEIPWKAILESPK 115

Query: 117 MEFKEWVKIDSCDGDSS---TTFSVPEVQVEIKIKVVASEKKDNSSKRLNK-WDECGCKQ 172
           MEFKEWVK+D   G S      F  P+VQVEIKI+V      +N  KRLN  WDECGCK 
Sbjct: 116 MEFKEWVKMDLVSGISDCEDIMFKAPQVQVEIKIQVEKENNNNNRRKRLNNKWDECGCKH 175

Query: 173 GHDHHAWCSAEDYHVFSFGAALEAF 197
           GH  HAWCSA+DY +++ GA LEAF
Sbjct: 176 GHGQHAWCSADDYDIYALGAVLEAF 200