Miyakogusa Predicted Gene

Lj0g3v0100119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100119.1 Non Chatacterized Hit- tr|G7JAN8|G7JAN8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,61.02,0.000000000000007,Myb_DNA-bind_3,Myb/SANT-like
domain,NODE_72594_length_213_cov_93.793427.path2.1
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g03460.1                                                        84   5e-17
Glyma11g34860.1                                                        74   3e-14

>Glyma18g03460.1 
          Length = 636

 Score = 83.6 bits (205), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/60 (68%), Positives = 47/60 (78%), Gaps = 2/60 (3%)

Query: 1  MSSTPAKASWPPAIHKAFVDVCLREMMKMNEPG-TRIAKVNWRNIVGSFYAKTGVRYTKK 59
          MS+  +KA+W P  H+ FVD+CL EM+K NEPG TRI K  WRNIVGSFYAKTGVRY KK
Sbjct: 1  MSNPASKATWTPGFHRVFVDLCLGEMLK-NEPGSTRITKAGWRNIVGSFYAKTGVRYDKK 59



 Score = 73.2 bits (178), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 1/58 (1%)

Query: 2   SSTPAKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTKK 59
           S TP KASW PA HK FVD+C+ E +K N+  T   K  WRNIVGSF AKTG+RY KK
Sbjct: 182 SPTP-KASWSPAYHKMFVDLCIEETLKGNKSATHFTKEGWRNIVGSFNAKTGMRYDKK 238



 Score = 71.2 bits (173), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/55 (54%), Positives = 40/55 (72%)

Query: 4   TPAKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTK 58
           T  KA+W P +HK FVD+C++E +K N+PGT   K  W+NI+ SFYAKTGV Y +
Sbjct: 361 TKVKATWTPTLHKIFVDLCMQETLKGNKPGTHFTKEGWKNIMESFYAKTGVNYGR 415


>Glyma11g34860.1 
          Length = 526

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 1/58 (1%)

Query: 2   SSTPAKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTKK 59
           S TP KASW PA HK FVD+C+ E +K N+  T   K  WRNIVGSF AKTG+RY KK
Sbjct: 81  SPTP-KASWSPAYHKMFVDLCIEETLKGNKSATHFTKEGWRNIVGSFNAKTGMRYDKK 137



 Score = 69.3 bits (168), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 40/55 (72%)

Query: 4   TPAKASWPPAIHKAFVDVCLREMMKMNEPGTRIAKVNWRNIVGSFYAKTGVRYTK 58
           T  KA+W P +HK FV++C++E +K N+PGT   K  W+NI+ SFYAKTG+ Y +
Sbjct: 273 TKVKAAWTPTLHKVFVNLCMQETLKGNKPGTHFTKEGWKNIMESFYAKTGLNYGR 327