Miyakogusa Predicted Gene

Lj0g3v0099929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0099929.1 tr|B3S4L3|B3S4L3_TRIAD Predicted protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_59127 PE=4
SV=1,36.3,9e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.5616.1
         (372 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g04570.1                                                       207   2e-53
Glyma02g07540.1                                                        72   7e-13

>Glyma05g04570.1 
          Length = 218

 Score =  207 bits (526), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 99/125 (79%), Positives = 105/125 (84%), Gaps = 6/125 (4%)

Query: 220 LPVFSDGTWDHNRHRWSNKRSSLSTYECWKCQRPGHMAEDCLVNSCSQITMGSKKSSSIP 279
           +PVF D TWD+N+H WS K  SLSTYECWKCQRPGH+AEDC+V      T GS +SSSIP
Sbjct: 4   VPVFGDDTWDYNQHHWSKKTCSLSTYECWKCQRPGHLAEDCMV------TDGSNRSSSIP 57

Query: 280 KDLLGLYRRCHQIGKDLLAANCNECRSSLNLATCLDCSIVLCDGEGHLDEHIRTHPSHQK 339
           KDLL LYRRCHQIGKDLLAANCN CR S NLATCLDCSIVLCDG GHL EHIRTHPSHQK
Sbjct: 58  KDLLQLYRRCHQIGKDLLAANCNVCRRSSNLATCLDCSIVLCDGAGHLIEHIRTHPSHQK 117

Query: 340 YYSHK 344
           YYSHK
Sbjct: 118 YYSHK 122


>Glyma02g07540.1 
          Length = 515

 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 39/48 (81%), Gaps = 1/48 (2%)

Query: 146 DGVKGRN-EQRFPVSGEPVCLMCGRYGEYICNETDDDVCSMECKSELL 192
           D VK R+ +QR  + GEP C++CGRYGEYIC+ETDDDVCS+ECK  LL
Sbjct: 25  DEVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQALL 72