Miyakogusa Predicted Gene

Lj0g3v0099219.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0099219.1 tr|K0KTJ7|K0KTJ7_9ASCO Transcription initiation
factor TFIID subunit 5 OS=Wickerhamomyces ciferrii
G,39.83,1e-16,LISH,LisH dimerisation motif; TFIID_90kDa,TFIID subunit,
WD40-associated region; SUBFAMILY NOT NAMED,CUFF.5613.1
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g06540.1                                                       239   4e-64
Glyma06g06570.1                                                       238   2e-63
Glyma04g06540.2                                                       236   5e-63
Glyma14g11980.1                                                        99   1e-21
Glyma06g06570.2                                                        66   7e-12
Glyma17g33880.2                                                        57   3e-09
Glyma17g33880.1                                                        57   3e-09

>Glyma04g06540.1 
          Length = 669

 Score =  239 bits (610), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 109/126 (86%), Positives = 118/126 (93%), Gaps = 2/126 (1%)

Query: 1   MDEDEIVGYVTAYLKKKGFTQTEKVFQEEFQHNKNTTTT--VEPDIANHLQALSQLETGP 58
           M++D+IVGYVTA+LKKKGFTQTEK+FQEEFQHNK+ T+   +EPDIANHL A SQLETGP
Sbjct: 1   MEDDKIVGYVTAFLKKKGFTQTEKIFQEEFQHNKSNTSNSLLEPDIANHLLAFSQLETGP 60

Query: 59  ARFHDGYSGLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNAFREDH 118
           ARFHDGYS LRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGH+QEARNFFN FREDH
Sbjct: 61  ARFHDGYSRLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFNTFREDH 120

Query: 119 EMMHLR 124
           EMMHLR
Sbjct: 121 EMMHLR 126


>Glyma06g06570.1 
          Length = 663

 Score =  238 bits (606), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 108/126 (85%), Positives = 118/126 (93%), Gaps = 2/126 (1%)

Query: 1   MDEDEIVGYVTAYLKKKGFTQTEKVFQEEFQHNKNTTTT--VEPDIANHLQALSQLETGP 58
           M++++IVGYVTA+LKKKGFTQTEK+FQEEFQHNK+ T+   +EPDIANHL A SQLETGP
Sbjct: 1   MEDEKIVGYVTAFLKKKGFTQTEKIFQEEFQHNKSNTSNSVLEPDIANHLLAFSQLETGP 60

Query: 59  ARFHDGYSGLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNAFREDH 118
           ARFHDGYS LRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGH+QEARNFFN FREDH
Sbjct: 61  ARFHDGYSRLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFNTFREDH 120

Query: 119 EMMHLR 124
           EMMHLR
Sbjct: 121 EMMHLR 126


>Glyma04g06540.2 
          Length = 595

 Score =  236 bits (601), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 109/126 (86%), Positives = 118/126 (93%), Gaps = 2/126 (1%)

Query: 1   MDEDEIVGYVTAYLKKKGFTQTEKVFQEEFQHNKNTTTT--VEPDIANHLQALSQLETGP 58
           M++D+IVGYVTA+LKKKGFTQTEK+FQEEFQHNK+ T+   +EPDIANHL A SQLETGP
Sbjct: 1   MEDDKIVGYVTAFLKKKGFTQTEKIFQEEFQHNKSNTSNSLLEPDIANHLLAFSQLETGP 60

Query: 59  ARFHDGYSGLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNAFREDH 118
           ARFHDGYS LRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGH+QEARNFFN FREDH
Sbjct: 61  ARFHDGYSRLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHVQEARNFFNTFREDH 120

Query: 119 EMMHLR 124
           EMMHLR
Sbjct: 121 EMMHLR 126


>Glyma14g11980.1 
          Length = 85

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 51/71 (71%), Gaps = 10/71 (14%)

Query: 54  LETGPARFHDGYSGLRTWTYSSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARNFFNA 113
           LE G AR+HDGY  LR+W Y SLD YKHELLRVLYP+F HC MDLVAKGHIQ        
Sbjct: 1   LERGSARYHDGYGRLRSWAYRSLDSYKHELLRVLYPLFFHCVMDLVAKGHIQ-------- 52

Query: 114 FREDHEMMHLR 124
             EDHEMMH R
Sbjct: 53  --EDHEMMHSR 61


>Glyma06g06570.2 
          Length = 566

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/29 (93%), Positives = 28/29 (96%)

Query: 96  MDLVAKGHIQEARNFFNAFREDHEMMHLR 124
           MDLVAKGH+QEARNFFN FREDHEMMHLR
Sbjct: 1   MDLVAKGHVQEARNFFNTFREDHEMMHLR 29


>Glyma17g33880.2 
          Length = 571

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/29 (82%), Positives = 26/29 (89%)

Query: 96  MDLVAKGHIQEARNFFNAFREDHEMMHLR 124
           MDLVAKG++QEA NFFN FREDHEMMH R
Sbjct: 1   MDLVAKGNLQEAWNFFNTFREDHEMMHSR 29


>Glyma17g33880.1 
          Length = 572

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/29 (82%), Positives = 26/29 (89%)

Query: 96  MDLVAKGHIQEARNFFNAFREDHEMMHLR 124
           MDLVAKG++QEA NFFN FREDHEMMH R
Sbjct: 1   MDLVAKGNLQEAWNFFNTFREDHEMMHSR 29