Miyakogusa Predicted Gene

Lj0g3v0098669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0098669.1 Non Chatacterized Hit- tr|I1L2S3|I1L2S3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,66.07,0.000000000002,no description,DNA-binding pseudobarrel
domain,CUFF.5526.1
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g20280.1                                                        77   6e-15
Glyma20g24240.1                                                        76   7e-15
Glyma10g40630.1                                                        69   8e-13
Glyma09g20060.1                                                        67   3e-12
Glyma20g24230.1                                                        66   1e-11
Glyma20g24270.1                                                        62   2e-10
Glyma13g05930.1                                                        60   6e-10
Glyma07g19380.1                                                        53   6e-08
Glyma18g30690.1                                                        52   1e-07
Glyma09g18790.1                                                        52   1e-07
Glyma16g05110.1                                                        51   2e-07
Glyma08g44650.1                                                        49   1e-06
Glyma19g27950.1                                                        48   2e-06
Glyma01g11670.1                                                        47   5e-06

>Glyma09g20280.1 
          Length = 197

 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 37/56 (66%), Positives = 43/56 (76%), Gaps = 1/56 (1%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLG 64
          K+PN FTRE+G ++SNPVFLKPPD  E KI W KH DG IWF+KGWKEFA+   L 
Sbjct: 1  KIPNKFTREYGVNLSNPVFLKPPDGIEWKIFWTKH-DGDIWFQKGWKEFATYYSLS 55


>Glyma20g24240.1 
          Length = 97

 Score = 76.3 bits (186), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 34/57 (59%), Positives = 44/57 (77%), Gaps = 1/57 (1%)

Query: 7  MQKLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEML 63
          +QK+PN FTR +GG +SNPVFL+PPD KE ++HW K E+G +WF+KGWKEF     L
Sbjct: 1  LQKIPNKFTRRYGGGLSNPVFLRPPDSKEWEVHWTK-ENGEVWFQKGWKEFVEYYSL 56


>Glyma10g40630.1 
          Length = 83

 Score = 69.3 bits (168), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 41/55 (74%)

Query: 5  SSMQKLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFAS 59
          S +Q +PN FT+ +GG++SNPVFLK PD  + K++W K + G IW  KGWKEFA+
Sbjct: 1  SFLQMIPNKFTKIYGGNLSNPVFLKAPDGIKWKVYWTKDDGGRIWLNKGWKEFAT 55


>Glyma09g20060.1 
          Length = 289

 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 10 LPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEML 63
          LP  FTR++G  +SNPVFLKP D  E KIH+ KH  G IWF+KGWKEFA+   L
Sbjct: 31 LPKKFTRKYGDGMSNPVFLKPADGTEWKIHYTKH-GGEIWFQKGWKEFATYYSL 83


>Glyma20g24230.1 
          Length = 200

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 1/50 (2%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFA 58
          ++PN FT+ HG  +SNPVF+KPPD  E ++ W K ++G +WFEKGWKEF 
Sbjct: 1  QIPNKFTKRHGDRLSNPVFMKPPDGTEWEVQWTK-QNGEVWFEKGWKEFV 49


>Glyma20g24270.1 
          Length = 254

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFA 58
          K+PN FT ++GG + NPVF+KP D  + K++W K ++G +WFEKGWKEF 
Sbjct: 1  KIPNKFTSKYGGGLPNPVFIKPLDGTQWKVNWTK-QNGEVWFEKGWKEFV 49


>Glyma13g05930.1 
          Length = 117

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 10 LPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEML 63
          LP  FT ++G  +SN VFL PPD  E KI W K  DG IWFEKGWKE+A+   L
Sbjct: 1  LPKDFTTKYGDSMSNLVFLNPPDGIEWKICWTK-LDGKIWFEKGWKEYATYYSL 53


>Glyma07g19380.1 
          Length = 211

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 3/51 (5%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGY-IWFEKGWKEFA 58
          K+P+ FTR H   +SNPV L  P+  +RK++W K  DG  +WF  GW+EFA
Sbjct: 1  KVPSSFTRRHWQGISNPVILSLPNGTKRKVYWLK--DGCDVWFSNGWREFA 49


>Glyma18g30690.1 
          Length = 232

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 10 LPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLG 64
          +PN F +++G  + N +FLK P+  E K+   K  DG IWF+KGWKEFA    L 
Sbjct: 32 IPNKFVKKYGKRLQNTLFLKTPNGAEWKMILKK-RDGKIWFQKGWKEFAEYHSLA 85


>Glyma09g18790.1 
          Length = 317

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/38 (63%), Positives = 29/38 (76%), Gaps = 1/38 (2%)

Query: 22 VSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFAS 59
          +SNPV LK PD    KI+W KH DG IWF+KGWKE+A+
Sbjct: 1  MSNPVSLKSPDSTRWKIYWTKH-DGEIWFQKGWKEYAT 37


>Glyma16g05110.1 
          Length = 313

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)

Query: 1  MLTVSSMQ----KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKE 56
          ++T  ++Q     +PN F  ++G  + N +FLK P+  E   +  KH DG IWF+KGWKE
Sbjct: 20 IITAQNLQDGKLMIPNKFVEKYGEGLPNALFLKTPNGTEWNFNLEKH-DGKIWFQKGWKE 78

Query: 57 FASVEMLG 64
          FA    L 
Sbjct: 79 FAEYHSLA 86


>Glyma08g44650.1 
          Length = 271

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLG 64
          +LP  F R++G  +SN + LK P+  E K++  K  DG +WF++GWK+FA    L 
Sbjct: 5  RLPEKFVRKYGNHLSNSMLLKLPNGIEWKVNLEK-RDGSVWFQEGWKDFAEYYSLA 59


>Glyma19g27950.1 
          Length = 261

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 11/72 (15%)

Query: 1  MLTVSSMQ----KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWN---KHEDGYIWFEKG 53
          ++T  ++Q     +PN +  ++G  + N +FLK P+  E    WN   K  DG IWF+KG
Sbjct: 19 IITAQNLQDGKLMIPNKYVDKYGEGLPNSLFLKTPNGTE----WNFNLKKRDGKIWFQKG 74

Query: 54 WKEFASVEMLGE 65
          WKEFA    L  
Sbjct: 75 WKEFAEYHSLAH 86


>Glyma01g11670.1 
          Length = 213

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)

Query: 10 LPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFA 58
          LPN F  ++G  + N +FLK P+  E K+   K +D  +WF+KGW+EFA
Sbjct: 14 LPNKFVEKYGEGLPNTLFLKAPNGAEWKLTLEKRDDK-MWFQKGWREFA 61