Miyakogusa Predicted Gene

Lj0g3v0098249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0098249.1 Non Chatacterized Hit- tr|I1JC93|I1JC93_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10656
PE,58.73,0.00000007, ,CUFF.5489.1
         (63 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g04600.1                                                        62   2e-10
Glyma02g04600.2                                                        62   2e-10

>Glyma02g04600.1 
          Length = 200

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 1  MGLTTLHPIPLSKLPTASTFLPKPFLPPRQQTLITPSAALLSRSIFVRNLLTRATSSDET 60
          MGL T+ PI LSKLP AS+FLPKP   P      TPSAA LSRS+ +RNL  +ATSS+E 
Sbjct: 1  MGLCTVQPITLSKLPNASSFLPKP--KPSLPQSYTPSAAHLSRSVCLRNLSPKATSSEEE 58

Query: 61 SGS 63
            S
Sbjct: 59 RSS 61


>Glyma02g04600.2 
          Length = 180

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 1  MGLTTLHPIPLSKLPTASTFLPKPFLPPRQQTLITPSAALLSRSIFVRNLLTRATSSDET 60
          MGL T+ PI LSKLP AS+FLPKP   P      TPSAA LSRS+ +RNL  +ATSS+E 
Sbjct: 1  MGLCTVQPITLSKLPNASSFLPKP--KPSLPQSYTPSAAHLSRSVCLRNLSPKATSSEEE 58

Query: 61 SGS 63
            S
Sbjct: 59 RSS 61