Miyakogusa Predicted Gene

Lj0g3v0097449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0097449.1 tr|A9TYR9|A9TYR9_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=YDG1501 PE=4
SV=1,45.61,1e-18,coiled-coil,NULL; seg,NULL,CUFF.5438.1
         (117 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g03980.2                                                       190   3e-49
Glyma12g03980.1                                                       190   3e-49
Glyma01g37160.1                                                       144   3e-35
Glyma11g08110.1                                                       142   9e-35
Glyma11g08110.2                                                       123   5e-29
Glyma03g22040.1                                                       107   3e-24
Glyma06g34210.1                                                       104   2e-23
Glyma03g24340.1                                                        99   7e-22

>Glyma12g03980.2 
          Length = 239

 Score =  190 bits (483), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 91/116 (78%), Positives = 97/116 (83%)

Query: 1   MTTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKG 60
           M+TKKPVVVE YDEIVFPDPSEAFL+RVQ HPAVNLPRLPAG+TLPP IPVEDASKRRKG
Sbjct: 123 MSTKKPVVVEFYDEIVFPDPSEAFLARVQNHPAVNLPRLPAGLTLPPSIPVEDASKRRKG 182

Query: 61  DTKDHSLTQWFTNFSEADEXXXXXXXXXXXXXHIAKLRRQISLIDGQQQQFKSTPE 116
           DTKDHSL+QWF NFSEADE             HIAKLRRQISLIDGQ QQFKS+ +
Sbjct: 183 DTKDHSLSQWFMNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQHQQFKSSSD 238


>Glyma12g03980.1 
          Length = 273

 Score =  190 bits (482), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 91/116 (78%), Positives = 97/116 (83%)

Query: 1   MTTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKG 60
           M+TKKPVVVE YDEIVFPDPSEAFL+RVQ HPAVNLPRLPAG+TLPP IPVEDASKRRKG
Sbjct: 157 MSTKKPVVVEFYDEIVFPDPSEAFLARVQNHPAVNLPRLPAGLTLPPSIPVEDASKRRKG 216

Query: 61  DTKDHSLTQWFTNFSEADEXXXXXXXXXXXXXHIAKLRRQISLIDGQQQQFKSTPE 116
           DTKDHSL+QWF NFSEADE             HIAKLRRQISLIDGQ QQFKS+ +
Sbjct: 217 DTKDHSLSQWFMNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQHQQFKSSSD 272


>Glyma01g37160.1 
          Length = 222

 Score =  144 bits (362), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 66/108 (61%), Positives = 81/108 (75%)

Query: 2   TTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKGD 61
           +TKKPVVVE Y+EIVFP+PSE FL+RVQ HPAVN+PRLPAG+ LP P+P++  + + +GD
Sbjct: 104 STKKPVVVESYNEIVFPEPSEGFLARVQNHPAVNVPRLPAGLNLPSPVPIDTVNDKERGD 163

Query: 62  TKDHSLTQWFTNFSEADEXXXXXXXXXXXXXHIAKLRRQISLIDGQQQ 109
           TKDH LTQWF NFSEADE             HI KLRRQ+SL++G  Q
Sbjct: 164 TKDHPLTQWFMNFSEADELLKLAAARQQVQAHIVKLRRQLSLVEGLPQ 211


>Glyma11g08110.1 
          Length = 279

 Score =  142 bits (358), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 81/111 (72%)

Query: 2   TTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKGD 61
           +TKKPVVVE Y+EIVFP+PSE FL+RVQ HPAVN+PRLPAG+ LP P+P +  + + +GD
Sbjct: 161 STKKPVVVESYNEIVFPEPSEVFLARVQNHPAVNVPRLPAGLNLPSPVPSDTVNDKERGD 220

Query: 62  TKDHSLTQWFTNFSEADEXXXXXXXXXXXXXHIAKLRRQISLIDGQQQQFK 112
           TKDH LTQWF NFSEADE             HI KLRRQ+SL++G  Q  K
Sbjct: 221 TKDHLLTQWFLNFSEADELLKLAAARQQVQAHIVKLRRQLSLVEGLPQLSK 271


>Glyma11g08110.2 
          Length = 269

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 55/78 (70%), Positives = 66/78 (84%)

Query: 2   TTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKGD 61
           +TKKPVVVE Y+EIVFP+PSE FL+RVQ HPAVN+PRLPAG+ LP P+P +  + + +GD
Sbjct: 161 STKKPVVVESYNEIVFPEPSEVFLARVQNHPAVNVPRLPAGLNLPSPVPSDTVNDKERGD 220

Query: 62  TKDHSLTQWFTNFSEADE 79
           TKDH LTQWF NFSEADE
Sbjct: 221 TKDHLLTQWFLNFSEADE 238


>Glyma03g22040.1 
          Length = 101

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/78 (62%), Positives = 60/78 (76%)

Query: 2  TTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKRRKGD 61
          + KK VVVE Y+EIVFP+PSE FL+ VQ H  VN+PRLPAG+ L  PIP +  + + +GD
Sbjct: 16 SMKKLVVVESYNEIVFPEPSEVFLAYVQNHHVVNVPRLPAGLNLSSPIPSDTVNDKERGD 75

Query: 62 TKDHSLTQWFTNFSEADE 79
          +KDH LTQWF NFSEADE
Sbjct: 76 SKDHPLTQWFLNFSEADE 93


>Glyma06g34210.1 
          Length = 154

 Score =  104 bits (260), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/104 (51%), Positives = 64/104 (61%), Gaps = 2/104 (1%)

Query: 2   TTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPP--IPVEDASKRRK 59
           + KKPVVVE Y+EIVFP+PSE FL+RVQ HPAVN+PRLPAG+ L               +
Sbjct: 46  SMKKPVVVESYNEIVFPEPSEVFLARVQNHPAVNVPRLPAGLNLSCSGTFLSMLFLFLLR 105

Query: 60  GDTKDHSLTQWFTNFSEADEXXXXXXXXXXXXXHIAKLRRQISL 103
           GDTKDH LTQWF NFSE DE             H  + R+Q S+
Sbjct: 106 GDTKDHPLTQWFLNFSEDDEILKLAAARQQQQFHQVEARQQSSM 149


>Glyma03g24340.1 
          Length = 99

 Score = 99.4 bits (246), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 51/89 (57%), Positives = 58/89 (65%), Gaps = 11/89 (12%)

Query: 2  TTKKPVVVELYDEIVFPDPSEAFLSRVQGHPAVNLPRLPAGVTLPPPIPVEDASKR---- 57
          +TKK VVVE Y+EIVFP+PSE FL+RVQ HP VN+PRL AG+ L  P             
Sbjct: 1  STKKLVVVESYNEIVFPEPSEVFLARVQNHPTVNVPRLLAGLNLSSPGTFLSMLFLFLLY 60

Query: 58 -------RKGDTKDHSLTQWFTNFSEADE 79
                 R+GDTKDH LTQWF NFSEADE
Sbjct: 61 QAMLWMIRRGDTKDHPLTQWFLNFSEADE 89