Miyakogusa Predicted Gene

Lj0g3v0097159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0097159.1 gene.g7414.t1.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g36640.1                                                       132   7e-32
Glyma02g36640.2                                                        77   3e-15
Glyma20g22290.1                                                        65   2e-11
Glyma10g28300.1                                                        64   3e-11
Glyma05g16860.1                                                        59   9e-10
Glyma17g23600.1                                                        57   4e-09

>Glyma02g36640.1 
          Length = 75

 Score =  132 bits (333), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 63/73 (86%), Positives = 70/73 (95%)

Query: 1  MPSRCAICCELLIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAIIFIDR 60
          MP+RC ICCE++IA+L+PPLGVC RHGCC+VEFIICLLLTILGYIPGIIYALYAIIF+DR
Sbjct: 1  MPTRCEICCEIMIAILIPPLGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDR 60

Query: 61 DQYFDESRRPLYA 73
          DQYFDE RRPLYA
Sbjct: 61 DQYFDEYRRPLYA 73


>Glyma02g36640.2 
          Length = 60

 Score = 77.4 bits (189), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/43 (81%), Positives = 41/43 (95%)

Query: 1  MPSRCAICCELLIAVLLPPLGVCLRHGCCTVEFIICLLLTILG 43
          MP+RC ICCE++IA+L+PPLGVC RHGCC+VEFIICLLLTILG
Sbjct: 1  MPTRCEICCEIMIAILIPPLGVCFRHGCCSVEFIICLLLTILG 43


>Glyma20g22290.1 
          Length = 57

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/50 (66%), Positives = 43/50 (86%), Gaps = 1/50 (2%)

Query: 6  AICCELLIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAI 55
          A C ++L+A++LPPLGV L++GC  VEF ICL+LT+ GYIPGIIYA+YAI
Sbjct: 7  ATCIDILLAIILPPLGVFLKYGC-QVEFWICLVLTLFGYIPGIIYAVYAI 55


>Glyma10g28300.1 
          Length = 57

 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/50 (64%), Positives = 43/50 (86%), Gaps = 1/50 (2%)

Query: 6  AICCELLIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAI 55
          A C ++L+A++LPPLGV L++GC  VEF ICL+LT+ GYIPGIIYA+Y+I
Sbjct: 7  ATCIDILLAIILPPLGVFLKYGC-QVEFWICLVLTLFGYIPGIIYAVYSI 55


>Glyma05g16860.1 
          Length = 54

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 41/47 (87%), Gaps = 1/47 (2%)

Query: 10 ELLIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAII 56
          E+++A+LLPP+GV LR+GC  VEF I L+LTILGYIPGIIYA+Y ++
Sbjct: 8  EVILAILLPPVGVFLRYGC-GVEFWIDLVLTILGYIPGIIYAIYVLV 53


>Glyma17g23600.1 
          Length = 54

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 40/47 (85%), Gaps = 1/47 (2%)

Query: 10 ELLIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAII 56
          E+++A+LLPP+GV LR+GC  VE  I L+LTILGYIPGIIYA+Y +I
Sbjct: 8  EVILAILLPPVGVFLRYGC-GVELWIDLVLTILGYIPGIIYAIYVLI 53