Miyakogusa Predicted Gene

Lj0g3v0097149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0097149.1 CUFF.5496.1
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g08030.1                                                       204   5e-53
Glyma02g36680.1                                                       198   3e-51
Glyma06g30880.1                                                       185   3e-47
Glyma04g23560.1                                                       184   3e-47

>Glyma17g08030.1 
          Length = 789

 Score =  204 bits (518), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 101/141 (71%), Positives = 108/141 (76%), Gaps = 2/141 (1%)

Query: 36  LPLLRPHGAALPNFSIKAGDSRFEGRERIRYTRDQLLQLREAVETXXXXXXXXXXXXAEL 95
           LPLLRPH  A   FSIKAGD+RFEGRER+RYTR+QLLQL+E VE             AEL
Sbjct: 45  LPLLRPHAGAPSPFSIKAGDARFEGRERVRYTREQLLQLKEGVEILDDVLKIKQDIEAEL 104

Query: 96  LGEDQTWGRSENNPPQQVQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFSNASQ 155
            GEDQ+W R ENNP QQ QNRY+EPDNRDWRGRSGQL  NADERSWDNLKENREF N S 
Sbjct: 105 FGEDQSWARPENNPTQQFQNRYTEPDNRDWRGRSGQLSGNADERSWDNLKENREFGNTS- 163

Query: 156 VNRQDQQNSQYGRAQISSNQG 176
            NRQDQ NSQ+ R QISSNQG
Sbjct: 164 -NRQDQLNSQFARTQISSNQG 183


>Glyma02g36680.1 
          Length = 784

 Score =  198 bits (503), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 102/141 (72%), Positives = 108/141 (76%), Gaps = 4/141 (2%)

Query: 36  LPLLRPHGAALPNFSIKAGDSRFEGRERIRYTRDQLLQLREAVETXXXXXXXXXXXXAEL 95
           LPLLRPHG A   FSIKAGD+RFEGRER+RYTR+QLL LRE VE             AEL
Sbjct: 44  LPLLRPHGGAPSPFSIKAGDARFEGRERVRYTREQLLLLREGVEILDDVLKIKQDIEAEL 103

Query: 96  LGEDQTWGRSENNPPQQVQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFSNASQ 155
            GEDQ+W RSENNP QQ   RYSEPDNRDWRGRSGQL  NADERSWDNLKENREF N + 
Sbjct: 104 FGEDQSWARSENNPSQQF--RYSEPDNRDWRGRSGQLSGNADERSWDNLKENREFGNTN- 160

Query: 156 VNRQDQQNSQYGRAQISSNQG 176
            NRQDQ NSQ+ RAQISSNQG
Sbjct: 161 -NRQDQLNSQFARAQISSNQG 180


>Glyma06g30880.1 
          Length = 775

 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/141 (65%), Positives = 105/141 (74%), Gaps = 8/141 (5%)

Query: 40  RPHGAALPNFSIKAGDSRFEGRERIRYTRDQLLQLREAVETXXXXXXXXXXXXAELLGED 99
           RPH +    FS+K GDSRFEG ER+RYTRDQLLQL+EAVE             AEL GED
Sbjct: 41  RPHAS----FSLKTGDSRFEGHERVRYTRDQLLQLKEAVEVPDDILKIKQDIEAELFGED 96

Query: 100 QTWGRSENNPPQQVQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFSN----ASQ 155
            +WGR+E+N P Q+QNRYSEPDNRDWRGRSGQ PA+ DERSW+NL++NREF N    ASQ
Sbjct: 97  PSWGRAESNLPHQLQNRYSEPDNRDWRGRSGQPPASTDERSWENLRDNREFGNRQQDASQ 156

Query: 156 VNRQDQQNSQYGRAQISSNQG 176
           VNR DQ NSQ+ R QISS QG
Sbjct: 157 VNRHDQLNSQFARTQISSMQG 177


>Glyma04g23560.1 
          Length = 774

 Score =  184 bits (468), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 92/145 (63%), Positives = 107/145 (73%), Gaps = 8/145 (5%)

Query: 36  LPLLRPHGAALPNFSIKAGDSRFEGRERIRYTRDQLLQLREAVETXXXXXXXXXXXXAEL 95
           LPL RPH      FS+K  DSRFEG ER+RY+RDQLLQL+EAVE             AE+
Sbjct: 35  LPLCRPHAY----FSLKTRDSRFEGHERVRYSRDQLLQLQEAVEVPDDILKIKQDIEAEI 90

Query: 96  LGEDQTWGRSENNPPQQVQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFSN--- 152
            GE+ +WGR+E+N P Q+QNRYSEPDNRDWRG SGQLPAN+DERSW+NL++NREF N   
Sbjct: 91  FGENPSWGRAESNLPHQLQNRYSEPDNRDWRGHSGQLPANSDERSWENLRDNREFGNRQQ 150

Query: 153 -ASQVNRQDQQNSQYGRAQISSNQG 176
            ASQVNR DQ NSQ+ R QISS QG
Sbjct: 151 DASQVNRHDQLNSQFARTQISSMQG 175