Miyakogusa Predicted Gene

Lj0g3v0095339.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0095339.1 tr|D7LPX2|D7LPX2_ARALL Calcium ion binding
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT,39.62,3e-17,PsbQ,Photosystem II PsbQ, oxygen evolving
complex; Oxygen-evolving enhancer protein 3,,PsbQ-like
dom,gene.g7271.t1.1
         (110 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g05320.1                                                       167   2e-42
Glyma11g31950.2                                                       166   5e-42
Glyma11g31950.1                                                       117   3e-27
Glyma07g14340.2                                                        68   2e-12
Glyma07g14340.1                                                        68   3e-12
Glyma03g26740.1                                                        67   5e-12
Glyma13g36240.1                                                        50   5e-07
Glyma12g34320.1                                                        50   5e-07

>Glyma18g05320.1 
          Length = 200

 Score =  167 bits (423), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 94/108 (87%)

Query: 1   MAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPG 60
           +APD+TVE+A +G + HAQDLL VR+LL  ESW+AAQ+ LRQSSA+L+KD+Y IIQSKPG
Sbjct: 90  VAPDMTVEDALSGVRGHAQDLLHVRDLLELESWRAAQKTLRQSSAILKKDIYTIIQSKPG 149

Query: 61  SERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILS 108
            ER QLR L+S LFNNV+RLDYAARDKD P++W+ YENIVVAVNDILS
Sbjct: 150 IERAQLRKLYSTLFNNVTRLDYAARDKDGPQVWQCYENIVVAVNDILS 197


>Glyma11g31950.2 
          Length = 189

 Score =  166 bits (420), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 78/108 (72%), Positives = 94/108 (87%)

Query: 1   MAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPG 60
           +APD+TVEEA +G + HAQDLL VR+LL  ESW+AAQ+ LRQSSA+L+KD+Y IIQSKPG
Sbjct: 80  VAPDMTVEEALSGVRGHAQDLLHVRDLLELESWRAAQKTLRQSSAILKKDIYIIIQSKPG 139

Query: 61  SERPQLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILS 108
            ER QLR L+S LFNNV+RLDYAARDKD P++W+ Y+NIVVAVNDILS
Sbjct: 140 IERAQLRKLYSTLFNNVTRLDYAARDKDGPQVWQCYKNIVVAVNDILS 187


>Glyma11g31950.1 
          Length = 202

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/80 (68%), Positives = 68/80 (85%)

Query: 1   MAPDLTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPG 60
           +APD+TVEEA +G + HAQDLL VR+LL  ESW+AAQ+ LRQSSA+L+KD+Y IIQSKPG
Sbjct: 80  VAPDMTVEEALSGVRGHAQDLLHVRDLLELESWRAAQKTLRQSSAILKKDIYIIIQSKPG 139

Query: 61  SERPQLRNLFSILFNNVSRL 80
            ER QLR L+S LFNNV+R+
Sbjct: 140 IERAQLRKLYSTLFNNVTRI 159


>Glyma07g14340.2 
          Length = 234

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 61/106 (57%)

Query: 5   LTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPGSERP 64
           L+  EA   AK  A++++ V++L+  ++W   Q  LR  +  LR DL  +I  KP  E+ 
Sbjct: 128 LSPTEAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAGKPKDEKK 187

Query: 65  QLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILSIL 110
            L+ L   LF ++S LD+AA+ K  PE  + Y   V ++ND+L+ L
Sbjct: 188 SLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKL 233


>Glyma07g14340.1 
          Length = 236

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 61/106 (57%)

Query: 5   LTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPGSERP 64
           L+  EA   AK  A++++ V++L+  ++W   Q  LR  +  LR DL  +I  KP  E+ 
Sbjct: 130 LSPTEAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAGKPKDEKK 189

Query: 65  QLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILSIL 110
            L+ L   LF ++S LD+AA+ K  PE  + Y   V ++ND+L+ L
Sbjct: 190 SLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKL 235


>Glyma03g26740.1 
          Length = 232

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 62/106 (58%)

Query: 5   LTVEEAQNGAKVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPGSERP 64
           L+  +A   AK  A++++ V++L+  ++W   Q  LR  +  LR DL  +I +KP  E+ 
Sbjct: 126 LSPTDAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVIAAKPKDEKK 185

Query: 65  QLRNLFSILFNNVSRLDYAARDKDVPEIWRRYENIVVAVNDILSIL 110
            L+ L   LF ++S LD+AA+ K  PE  + Y   V ++ND+L+ L
Sbjct: 186 SLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKL 231


>Glyma13g36240.1 
          Length = 233

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 51/93 (54%)

Query: 15  KVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPGSERPQLRNLFSILF 74
           K +A DLL + +L+  ++    ++ LR  S  +  D   II + P  ++ QL ++ + LF
Sbjct: 131 KKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMYYDFDKIIPAIPVDDKQQLTDMANKLF 190

Query: 75  NNVSRLDYAARDKDVPEIWRRYENIVVAVNDIL 107
           +N  RL+ A+R K +PE    Y+   V + +++
Sbjct: 191 DNFERLEEASRKKSLPETKSCYQETEVMLKEVM 223


>Glyma12g34320.1 
          Length = 250

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 51/93 (54%)

Query: 15  KVHAQDLLQVRELLGAESWKAAQRALRQSSALLRKDLYAIIQSKPGSERPQLRNLFSILF 74
           K +A DLL + +L+  ++    ++ LR  S  +  D   +I + P  ++ QL ++ + LF
Sbjct: 148 KKYAFDLLAMADLIAEDTLNYVRKYLRLKSTFMYYDFDKVISAIPVDDKQQLTDMANKLF 207

Query: 75  NNVSRLDYAARDKDVPEIWRRYENIVVAVNDIL 107
           +N  RL+ A+R K +PE    Y+   V + +++
Sbjct: 208 DNFERLEEASRKKSLPETKSCYQETEVMLKEVM 240