Miyakogusa Predicted Gene

Lj0g3v0093829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0093829.1 Non Chatacterized Hit- tr|I1LF75|I1LF75_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49708
PE,43.48,0.00000003,seg,NULL,CUFF.5169.1
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g43080.1                                                        57   5e-09
Glyma20g23860.1                                                        55   2e-08

>Glyma10g43080.1 
          Length = 1283

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 27/34 (79%), Positives = 29/34 (85%), Gaps = 4/34 (11%)

Query: 75  KRDPK----ESLMCHQCQRNDKGPVVRCTNCKRK 104
           K+DPK    ESLMCHQCQRNDKG VVRCT+CKRK
Sbjct: 398 KKDPKCIKEESLMCHQCQRNDKGRVVRCTSCKRK 431


>Glyma20g23860.1 
          Length = 959

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/30 (83%), Positives = 26/30 (86%)

Query: 75  KRDPKESLMCHQCQRNDKGPVVRCTNCKRK 104
           K D +ESLMCHQCQRNDKG VVRCT CKRK
Sbjct: 222 KEDDEESLMCHQCQRNDKGRVVRCTRCKRK 251