Miyakogusa Predicted Gene

Lj0g3v0093659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0093659.1 Non Chatacterized Hit- tr|K4BBP3|K4BBP3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.84,3e-19,seg,NULL,CUFF.5163.1
         (149 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g04490.3                                                       160   3e-40
Glyma01g04490.2                                                       160   3e-40
Glyma01g04490.1                                                       160   3e-40
Glyma02g03060.1                                                       152   9e-38
Glyma08g40390.2                                                       114   3e-26
Glyma08g40390.1                                                       114   4e-26
Glyma08g40400.1                                                       108   2e-24
Glyma18g17230.1                                                        98   4e-21
Glyma08g40420.1                                                        61   6e-10
Glyma19g01920.1                                                        60   7e-10
Glyma19g01920.2                                                        60   8e-10
Glyma13g04790.1                                                        55   3e-08
Glyma13g04790.3                                                        55   3e-08
Glyma13g04790.2                                                        54   7e-08

>Glyma01g04490.3 
          Length = 1361

 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/162 (61%), Positives = 109/162 (67%), Gaps = 18/162 (11%)

Query: 2   SARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXXX 61
           SARNS+LRDR SAMPT+RQ HV KRERT VSH D DPSV+RPDPDHDRGLL         
Sbjct: 172 SARNSMLRDRSSAMPTIRQLHVEKRERTIVSHGDHDPSVDRPDPDHDRGLLRIEKERRRV 231

Query: 62  XXXXXDHREDGKRDWERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPLLDADGFF-- 119
                   +  KR+ ERD RD+EHDG R RER SHKR  +RKAED GAEPLLDAD  F  
Sbjct: 232 EKEKERREDRDKRERERDDRDYEHDGARDRERFSHKR--NRKAEDSGAEPLLDADENFGV 289

Query: 120 --------------AKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                         + Y +EFAFC+KVKEKLRNPDDYQEFLK
Sbjct: 290 RPMSSTCDDKNSLKSMYSQEFAFCEKVKEKLRNPDDYQEFLK 331


>Glyma01g04490.2 
          Length = 1361

 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/162 (61%), Positives = 109/162 (67%), Gaps = 18/162 (11%)

Query: 2   SARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXXX 61
           SARNS+LRDR SAMPT+RQ HV KRERT VSH D DPSV+RPDPDHDRGLL         
Sbjct: 172 SARNSMLRDRSSAMPTIRQLHVEKRERTIVSHGDHDPSVDRPDPDHDRGLLRIEKERRRV 231

Query: 62  XXXXXDHREDGKRDWERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPLLDADGFF-- 119
                   +  KR+ ERD RD+EHDG R RER SHKR  +RKAED GAEPLLDAD  F  
Sbjct: 232 EKEKERREDRDKRERERDDRDYEHDGARDRERFSHKR--NRKAEDSGAEPLLDADENFGV 289

Query: 120 --------------AKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                         + Y +EFAFC+KVKEKLRNPDDYQEFLK
Sbjct: 290 RPMSSTCDDKNSLKSMYSQEFAFCEKVKEKLRNPDDYQEFLK 331


>Glyma01g04490.1 
          Length = 1361

 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/162 (61%), Positives = 109/162 (67%), Gaps = 18/162 (11%)

Query: 2   SARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXXX 61
           SARNS+LRDR SAMPT+RQ HV KRERT VSH D DPSV+RPDPDHDRGLL         
Sbjct: 172 SARNSMLRDRSSAMPTIRQLHVEKRERTIVSHGDHDPSVDRPDPDHDRGLLRIEKERRRV 231

Query: 62  XXXXXDHREDGKRDWERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPLLDADGFF-- 119
                   +  KR+ ERD RD+EHDG R RER SHKR  +RKAED GAEPLLDAD  F  
Sbjct: 232 EKEKERREDRDKRERERDDRDYEHDGARDRERFSHKR--NRKAEDSGAEPLLDADENFGV 289

Query: 120 --------------AKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                         + Y +EFAFC+KVKEKLRNPDDYQEFLK
Sbjct: 290 RPMSSTCDDKNSLKSMYSQEFAFCEKVKEKLRNPDDYQEFLK 331


>Glyma02g03060.1 
          Length = 1227

 Score =  152 bits (385), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/163 (58%), Positives = 106/163 (65%), Gaps = 18/163 (11%)

Query: 1   MSARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXX 60
           +SARNS+LRDR SAMPT+RQ HV KRERT VSH D DPSV+RPDPD+DRGLL        
Sbjct: 171 VSARNSMLRDRSSAMPTIRQLHVEKRERTIVSHGDHDPSVDRPDPDNDRGLLRIEKERRR 230

Query: 61  XXXXXXDHREDGKRDWERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPLLDADGFF- 119
                    +  KRD ERD RD EHDG R RER SHKR  +RK ED GAEP LDAD  F 
Sbjct: 231 VEKEKERREDRDKRDRERDDRDFEHDGARDRERFSHKR--NRKVEDSGAEPFLDADENFG 288

Query: 120 ---------------AKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                          + Y +EFAFC+ VKEKLRNPDDYQEFLK
Sbjct: 289 APPMPSTCDDKNSLKSMYSQEFAFCENVKEKLRNPDDYQEFLK 331


>Glyma08g40390.2 
          Length = 1290

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 87/161 (54%), Gaps = 34/161 (21%)

Query: 3   ARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXXXX 62
           ARNS+L DR SAMP +RQ HV KRER   SH DRD S + PDP+ DR L+          
Sbjct: 204 ARNSLLPDRSSAMPIIRQMHVEKRERNIASHGDRDLSADHPDPELDRCLI-----RADKD 258

Query: 63  XXXXDHREDGKRDWERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPLLDADGFFAKY 122
               D +E G RD++ DG             +S KRKS  +AED GAEPL D D  F  +
Sbjct: 259 QRRHDEKEKGSRDYDHDG-------------ISRKRKSGIRAEDSGAEPLHDTDENFGMH 305

Query: 123 PEEFA----------------FCDKVKEKLRNPDDYQEFLK 147
           P  +A                + DKVKEKLRNP+DYQEFLK
Sbjct: 306 PISYACEDKSSLKSMYSPVLGYLDKVKEKLRNPEDYQEFLK 346


>Glyma08g40390.1 
          Length = 1330

 Score =  114 bits (285), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/161 (45%), Positives = 87/161 (54%), Gaps = 34/161 (21%)

Query: 3   ARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXXXX 62
           ARNS+L DR SAMP +RQ HV KRER   SH DRD S + PDP+ DR L+          
Sbjct: 204 ARNSLLPDRSSAMPIIRQMHVEKRERNIASHGDRDLSADHPDPELDRCLI-----RADKD 258

Query: 63  XXXXDHREDGKRDWERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPLLDADGFFAKY 122
               D +E G RD++ DG             +S KRKS  +AED GAEPL D D  F  +
Sbjct: 259 QRRHDEKEKGSRDYDHDG-------------ISRKRKSGIRAEDSGAEPLHDTDENFGMH 305

Query: 123 PEEFA----------------FCDKVKEKLRNPDDYQEFLK 147
           P  +A                + DKVKEKLRNP+DYQEFLK
Sbjct: 306 PISYACEDKSSLKSMYSPVLGYLDKVKEKLRNPEDYQEFLK 346


>Glyma08g40400.1 
          Length = 603

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/154 (44%), Positives = 88/154 (57%), Gaps = 10/154 (6%)

Query: 2   SARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXXX 61
           S +NS+L DR SAMPT+RQ HV KRER   SH D D S + PDP+ D  L+         
Sbjct: 167 SVQNSLLHDRSSAMPTIRQMHVEKRERNIASHGDHDLSADHPDPELDSCLMMADKDQRRR 226

Query: 62  XXXXXDHRED-GKRDWERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPL-------L 113
                D R+   +R+ ERD  D++HDG   RE LSHKRKS  +AED GAE +        
Sbjct: 227 GAKENDCRKGRDRREQERDDGDYDHDGS--REHLSHKRKSGCRAEDSGAESMHPISYACE 284

Query: 114 DADGFFAKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
           D     +     F + +KVKEKL+NP+ +QEFLK
Sbjct: 285 DISSLKSMCSPVFGYLEKVKEKLQNPEVFQEFLK 318


>Glyma18g17230.1 
          Length = 1424

 Score = 97.8 bits (242), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/162 (42%), Positives = 85/162 (52%), Gaps = 38/162 (23%)

Query: 2   SARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXXX 61
           +A NS+L DR     T+RQ HV K+ER   SH DRD   + PDP+ DR L+         
Sbjct: 196 TANNSLLHDR----TTIRQMHVEKKERNIASHGDRDLGADHPDPELDRCLI--------- 242

Query: 62  XXXXXDHREDGKRDWERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPLLDADGFF-- 119
                  R D K   E+D RD++HDG      +SHKRKS  +AED GAEPL D D  F  
Sbjct: 243 RADKDQRRRDEK---EKDSRDYDHDG------ISHKRKSGCRAEDSGAEPLHDTDENFGM 293

Query: 120 --------------AKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                         + Y     + DKVK+KLRNP+DYQEFLK
Sbjct: 294 HRISYACEDKSSLKSMYSPVLGYLDKVKDKLRNPEDYQEFLK 335


>Glyma08g40420.1 
          Length = 665

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 51/158 (32%), Positives = 72/158 (45%), Gaps = 47/158 (29%)

Query: 2   SARNSVLRDRRSAMPTVRQAHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXXXXXX 61
           SA+NS+ R++ SA+P V+Q  V+KR+RT  SH D +  V                     
Sbjct: 197 SAQNSLFREKSSAVPIVQQMCVLKRKRTKTSHDDHNHIVG-------------------- 236

Query: 62  XXXXXDHREDGKRDW---ERDGRDHEHDGGRYRERLSHKRKSDRKAEDFGAEPLLDADGF 118
                 HR +   DW   E+D RD+  DG   ++ LS KR     AED  A    + D  
Sbjct: 237 ------HRLES--DWSEREKDNRDYYQDG--IQKLLSLKRTHFCMAEDLMARSFCNVDKH 286

Query: 119 FAKYP--------------EEFAFCDKVKEKLRNPDDY 142
           F  +P              E F+FC K+K+KL+NP +Y
Sbjct: 287 FGMHPMPSTCYDQSSMKSSERFSFCAKIKDKLQNPKNY 324


>Glyma19g01920.1 
          Length = 1402

 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 80/167 (47%), Gaps = 40/167 (23%)

Query: 4   RNSVLR--DRRSAMPTVRQAHVVKRERT----TVSHCDRDPSVNRPDPDHDRGLLXXXXX 57
           RNS+ R  +R S  P +RQ    K +R       SH DRD S  RP+ D D+ ++     
Sbjct: 227 RNSLQRFNERGSMAPMIRQMPADKAQRYRRDRLPSH-DRDMSAERPELDDDKTMMNI--- 282

Query: 58  XXXXXXXXXDHREDGKRDW------ERDGRDHEHDGGR--YRERLSHKRKSDRKAEDFGA 109
                     H+E  KR+       ++D R+H+ D  R    +R   K+KS +KAE FG 
Sbjct: 283 ----------HKEQRKRESRERRMRDQDEREHDLDNNRDLNLQRFPDKKKSVKKAEGFGM 332

Query: 110 EP---------LLDADGFFAKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                       L++ G    Y + F+FC+KVK KL + DDYQ FLK
Sbjct: 333 ASDFASYEDKDTLNSPGM---YSQAFSFCEKVKGKLSSSDDYQTFLK 376


>Glyma19g01920.2 
          Length = 1326

 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 80/167 (47%), Gaps = 40/167 (23%)

Query: 4   RNSVLR--DRRSAMPTVRQAHVVKRERT----TVSHCDRDPSVNRPDPDHDRGLLXXXXX 57
           RNS+ R  +R S  P +RQ    K +R       SH DRD S  RP+ D D+ ++     
Sbjct: 151 RNSLQRFNERGSMAPMIRQMPADKAQRYRRDRLPSH-DRDMSAERPELDDDKTMMNI--- 206

Query: 58  XXXXXXXXXDHREDGKRDW------ERDGRDHEHDGGR--YRERLSHKRKSDRKAEDFGA 109
                     H+E  KR+       ++D R+H+ D  R    +R   K+KS +KAE FG 
Sbjct: 207 ----------HKEQRKRESRERRMRDQDEREHDLDNNRDLNLQRFPDKKKSVKKAEGFGM 256

Query: 110 EP---------LLDADGFFAKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                       L++ G    Y + F+FC+KVK KL + DDYQ FLK
Sbjct: 257 ASDFASYEDKDTLNSPGM---YSQAFSFCEKVKGKLSSSDDYQTFLK 300


>Glyma13g04790.1 
          Length = 1353

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 42/159 (26%)

Query: 4   RNSVLR--DRRSAMPTVRQ-----AHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXX 56
           RNS+ R  +R S  P +RQ     A   +R+R      D D S  RP+ D D+ ++    
Sbjct: 221 RNSLHRFNERGSMAPMIRQMPADKAQRYRRDRLPSHDRDHDMSAERPELDDDKTMMNI-- 278

Query: 57  XXXXXXXXXXDHREDGKRDW------ERDGRDHEHDGGR--YRERLSHKRKSDRKAEDFG 108
                      H+E  KR+       ++D R+H+ D  R    +R   K+KS +KAE   
Sbjct: 279 -----------HKEQRKRESRERRMRDQDEREHDLDNNRDLNLQRFPDKKKSVKKAE--- 324

Query: 109 AEPLLDADGFFAKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                        Y + F+FC+KVKEKL + DDYQ FLK
Sbjct: 325 -----------GMYSQAFSFCEKVKEKLSSSDDYQTFLK 352


>Glyma13g04790.3 
          Length = 1282

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 42/159 (26%)

Query: 4   RNSVLR--DRRSAMPTVRQ-----AHVVKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXX 56
           RNS+ R  +R S  P +RQ     A   +R+R      D D S  RP+ D D+ ++    
Sbjct: 151 RNSLHRFNERGSMAPMIRQMPADKAQRYRRDRLPSHDRDHDMSAERPELDDDKTMMNI-- 208

Query: 57  XXXXXXXXXXDHREDGKRDW------ERDGRDHEHDGGR--YRERLSHKRKSDRKAEDFG 108
                      H+E  KR+       ++D R+H+ D  R    +R   K+KS +KAE   
Sbjct: 209 -----------HKEQRKRESRERRMRDQDEREHDLDNNRDLNLQRFPDKKKSVKKAE--- 254

Query: 109 AEPLLDADGFFAKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                        Y + F+FC+KVKEKL + DDYQ FLK
Sbjct: 255 -----------GMYSQAFSFCEKVKEKLSSSDDYQTFLK 282


>Glyma13g04790.2 
          Length = 1301

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 73/158 (46%), Gaps = 41/158 (25%)

Query: 4   RNSVLR--DRRSAMPTVRQAHV----VKRERTTVSHCDRDPSVNRPDPDHDRGLLXXXXX 57
           RNS+ R  +R S  P +RQ        +R+R      D D S  RP+ D D+ ++     
Sbjct: 151 RNSLHRFNERGSMAPMIRQMPADKQRYRRDRLPSHDRDHDMSAERPELDDDKTMMNI--- 207

Query: 58  XXXXXXXXXDHREDGKRDW------ERDGRDHEHDGGR--YRERLSHKRKSDRKAEDFGA 109
                     H+E  KR+       ++D R+H+ D  R    +R   K+KS +KAE    
Sbjct: 208 ----------HKEQRKRESRERRMRDQDEREHDLDNNRDLNLQRFPDKKKSVKKAE---- 253

Query: 110 EPLLDADGFFAKYPEEFAFCDKVKEKLRNPDDYQEFLK 147
                       Y + F+FC+KVKEKL + DDYQ FLK
Sbjct: 254 ----------GMYSQAFSFCEKVKEKLSSSDDYQTFLK 281