Miyakogusa Predicted Gene

Lj0g3v0093459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0093459.1 Non Chatacterized Hit- tr|I1HCS0|I1HCS0_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,36.9,4e-17,
,CUFF.5142.1
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g27590.1                                                       266   6e-72
Glyma02g08460.1                                                       118   3e-27
Glyma20g04250.1                                                        74   1e-13

>Glyma16g27590.1 
          Length = 192

 Score =  266 bits (681), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 130/190 (68%), Positives = 151/190 (79%), Gaps = 19/190 (10%)

Query: 2   EEEKAPLIGEIEETS----QVSNTTESERHVRTKVPEVEIHLFRQGKGPVAVFX------ 51
           ++EK PL+GEIEE      +   T+E E+ VRTKVPE EIHL+RQGKGPVAVF       
Sbjct: 3   DDEKTPLVGEIEEVDASPVEEEGTSEREKRVRTKVPEAEIHLYRQGKGPVAVFKSALGGW 62

Query: 52  ---------DILDKHGFKSLYAFNPQFRSRGVPVRFNPRNGRSLLTYRDGVVVYLDGEPK 102
                    DIL+K+G KS++AFNP    RGVPVRFNPRNGRS+LTYRDG VVYLDGEPK
Sbjct: 63  EQDQLEIREDILEKYGMKSVFAFNPTAGGRGVPVRFNPRNGRSILTYRDGAVVYLDGEPK 122

Query: 103 DSLVQPVTRILIGVAVVTLMITILSRDTPEWMKKLNVSSVNFPPWILACVVIVFTRMRKR 162
           DSLV+PVTRIL+GVA++T MIT++SRDTP W+KKLN S VNFPPWILACVVIVFTRMRKR
Sbjct: 123 DSLVKPVTRILVGVALITFMITLVSRDTPNWLKKLNFSGVNFPPWILACVVIVFTRMRKR 182

Query: 163 TKDFLKRRGW 172
           T+DFLK+RGW
Sbjct: 183 TRDFLKKRGW 192


>Glyma02g08460.1 
          Length = 70

 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 65/69 (94%)

Query: 102 KDSLVQPVTRILIGVAVVTLMITILSRDTPEWMKKLNVSSVNFPPWILACVVIVFTRMRK 161
           +DSLV+PVTRIL+GVA++T MIT++SRDTP+W+KKLN S VNFPPWILACVVIVFTR RK
Sbjct: 1   QDSLVKPVTRILVGVALITFMITLVSRDTPDWLKKLNFSGVNFPPWILACVVIVFTRTRK 60

Query: 162 RTKDFLKRR 170
           RT+DFLK+R
Sbjct: 61  RTRDFLKKR 69


>Glyma20g04250.1 
          Length = 87

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 15/83 (18%)

Query: 2  EEEKAPLIGEIEETSQVSNTTESERHVRTKVPEVEIHLFRQGKGPVAVF----------- 50
          +EEK  L+GEI+E     + +E E+  ++KVPE EIHL+RQGKGP+AVF           
Sbjct: 3  DEEKRALMGEIKEECVSPDKSEQEKQRQSKVPEAEIHLYRQGKGPMAVFKSALGDWEQDQ 62

Query: 51 ----XDILDKHGFKSLYAFNPQF 69
               DIL+KH  K ++AFNP F
Sbjct: 63 LEFREDILEKHDMKLVFAFNPTF 85