Miyakogusa Predicted Gene

Lj0g3v0093179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0093179.1 Non Chatacterized Hit- tr|I1LUY5|I1LUY5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10890
PE,88.46,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.5116.1
         (59 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g38160.1                                                       100   4e-22
Glyma12g35050.3                                                       100   6e-22
Glyma12g35050.2                                                       100   6e-22
Glyma12g23140.1                                                        99   7e-22
Glyma12g35050.1                                                        99   1e-21

>Glyma06g38160.1 
          Length = 399

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 48/54 (88%), Positives = 49/54 (90%)

Query: 6   VMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           + QVV DPSLTKSGVYWSWN  SASFENQLSQEASDADKARKVWEISEKL GLA
Sbjct: 346 LAQVVSDPSLTKSGVYWSWNAASASFENQLSQEASDADKARKVWEISEKLTGLA 399


>Glyma12g35050.3 
          Length = 284

 Score = 99.8 bits (247), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/52 (88%), Positives = 48/52 (92%)

Query: 8   QVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           QVV DPSLTKSGVYWSWNK SASFENQLSQEASD +KARK+WEISEKLVG A
Sbjct: 233 QVVSDPSLTKSGVYWSWNKASASFENQLSQEASDTEKARKIWEISEKLVGFA 284


>Glyma12g35050.2 
          Length = 284

 Score = 99.8 bits (247), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 46/52 (88%), Positives = 48/52 (92%)

Query: 8   QVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           QVV DPSLTKSGVYWSWNK SASFENQLSQEASD +KARK+WEISEKLVG A
Sbjct: 233 QVVSDPSLTKSGVYWSWNKASASFENQLSQEASDTEKARKIWEISEKLVGFA 284


>Glyma12g23140.1 
          Length = 238

 Score = 99.4 bits (246), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 48/56 (85%), Positives = 49/56 (87%)

Query: 4   FIVMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           FI + VV DPSLTKSGVYWSWN  SASFENQLSQEASDADKA KVWEISEKL GLA
Sbjct: 183 FIPLHVVSDPSLTKSGVYWSWNAASASFENQLSQEASDADKACKVWEISEKLTGLA 238


>Glyma12g35050.1 
          Length = 399

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 49/54 (90%)

Query: 6   VMQVVGDPSLTKSGVYWSWNKDSASFENQLSQEASDADKARKVWEISEKLVGLA 59
           + QVV DPSLTKSGVYWSWNK SASFENQLSQEASD +KARK+WEISEKLVG A
Sbjct: 346 LAQVVSDPSLTKSGVYWSWNKASASFENQLSQEASDTEKARKIWEISEKLVGFA 399