Miyakogusa Predicted Gene

Lj0g3v0092949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0092949.1 Non Chatacterized Hit- tr|F6H2E5|F6H2E5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.04,0.000000009,seg,NULL,CUFF.5098.1
         (556 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g42320.1                                                       408   e-114

>Glyma06g42320.1 
          Length = 550

 Score =  408 bits (1049), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 274/579 (47%), Positives = 331/579 (57%), Gaps = 52/579 (8%)

Query: 1   MEASKKIEIVIKKANHHWAFLEHIEAPMWADLTLEANSLGEDKSDGDWFNTSHPFHQWSA 60
           ME SKK  I +KK+   WAFLEHIEAPMW DLTLE  S   D  D +WFNTSHPFHQ SA
Sbjct: 1   METSKKKAITMKKSFDPWAFLEHIEAPMWVDLTLEVKSGCVDTGDDEWFNTSHPFHQMSA 60

Query: 61  RELKSKFSHPGEEIVTSSVDLQGLTSPKLPSSVSRSRGKDYNSKKWEGTNLSILLDKQQG 120
           RELKS+FSH GEEI+TS VD     SP+LPSSVSRSRGK YN+KKWEG +L+ LLDKQ+G
Sbjct: 61  RELKSRFSH-GEEILTSGVD-----SPELPSSVSRSRGKHYNNKKWEGIDLNSLLDKQKG 114

Query: 121 LSGRCLQQGSRFAQEVKPKSKSIAGRPNGLLSTKLGLPYT--GSGKTKSIASC-----SS 173
           LS R  QQGS F QEVKPK  S   +P G    KLGL +     GKT S+ +C     SS
Sbjct: 115 LSRRGFQQGSSFGQEVKPKPNSNVNKPKG---GKLGLAFERKSRGKTDSMVNCSNPPSSS 171

Query: 174 NLDDKSGQSSTRSTITSENTLQKHKEVTRQPCDKKSGSLSVMSSLGNRCVTKKASTFQRQ 233
           + + K   S+ RSTITSENT QK++EV+ +P D+K  S     SLG  CVT+K S+   Q
Sbjct: 172 SSNHKCEGSTARSTITSENT-QKYREVSSKPFDQKRSSSIRRVSLGKSCVTRKVSSILPQ 230

Query: 234 -QCMGVSSQPFDQXXXXXXXXXXXXXXYVT--ASRVEVGVD----SMLXXXXXXXXXXXX 286
            +C+ VSSQP DQ              YV+  AS+VE+G D    SM+            
Sbjct: 231 KECLEVSSQPCDQ-KSRSSSVISVRRSYVSGKASKVEIGGDSTARSMITSENTRKYREVS 289

Query: 287 XXXXXNPGYGAKIVPKQRSEKIRDGKDVNAMDHADKKGRNP-XXXXXXXXXXXIRKSYVT 345
                        V   +S   R    +       +    P            +R+SYV 
Sbjct: 290 SKPCAQQSSSVGRVSLGKSCVTRKVSSIQPQKKCLEVSSQPCDQKSRSSSVISVRRSYVL 349

Query: 346 EKASKVEMGVDSMQXXXXXXXXXXXXXXXXXXXXFEAMFASKQQGEEITDEKD--LMNPA 403
            +ASKVE G DSM+                         + KQQ E+IT +K    MN A
Sbjct: 350 GEASKVESGGDSMRSRGRKSS------------------SGKQQREKITIDKGEVTMNLA 391

Query: 404 VKNRCNPGNKSKASVVLIERANFGNRKGGNIDYAKPAYHRTAKSLVQSQFTSSRAKLPCK 463
           VKNRC P  +SK S + +E A  GNRK  +I++AKPAYHRTAKSLVQ    SS+A L   
Sbjct: 392 VKNRCKPSERSKTSTISVEEAKSGNRKRNSINFAKPAYHRTAKSLVQYSSASSKALLQHT 451

Query: 464 VNKENSCT-GTKERLGTSKV-----KGKENAIRNVTMNQKCNERGVRAGGTLKTQRTTGH 517
           VNKEN+C  G KE+L T+KV     KGKEN  RNV +NQKC  RG  AGG +++ RTT H
Sbjct: 452 VNKENTCIGGAKEKLRTTKVKSLTAKGKENVSRNVAVNQKCISRGASAGGLVRSHRTTEH 511

Query: 518 VHRQNDDIAGSAALTILGKVTDQREAKNPTNRDRRIYLR 556
            H Q  D AGS ALTI+G+  DQ EAKN  N  + IYLR
Sbjct: 512 NHPQKGDKAGSTALTIVGRDNDQHEAKNQINLAKSIYLR 550