Miyakogusa Predicted Gene

Lj0g3v0092139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0092139.1 tr|F2E5W0|F2E5W0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,90,0.000000003,seg,NULL;
coiled-coil,NULL,CUFF.5035.1
         (711 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g35610.1                                                       259   6e-69
Glyma13g34820.1                                                       236   9e-62

>Glyma12g35610.1 
          Length = 635

 Score =  259 bits (663), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 173/347 (49%), Positives = 183/347 (52%), Gaps = 47/347 (13%)

Query: 25  ELFVCFXXXXXXXXXXXXXXXXXXPSRGRDPPPQIXXXXXXXXXXXXNGSMKGG----QA 80
           ELFVCF                  PSR RDPP QI            NGS+KGG    QA
Sbjct: 20  ELFVCFTSRLSSSSMKLSSKSILSPSRSRDPP-QISLSSSLSRRLRSNGSIKGGGGGGQA 78

Query: 81  SPMFPTNGKRRGCG---FENPEPSSPKVTCIGQVRVKTKKQGKKMRARSKRRGEASFRKV 137
           SPMFPT G  +  G   FENPEPSSPKVTCIGQVRVKTKKQGKKMRARSKRRGEASFRK 
Sbjct: 79  SPMFPTGGGGKRRGGCGFENPEPSSPKVTCIGQVRVKTKKQGKKMRARSKRRGEASFRK- 137

Query: 138 AEMQGFQXXXXXXXXPDLTRQNSQSSFGFQNHSQSLQQECLKHR-NQRWVHLPLTICEAL 196
                           DLTRQ+SQ   GFQ+H     Q CLKHR NQRWVHLPLTICEAL
Sbjct: 138 ----------------DLTRQSSQ---GFQHH-----QNCLKHRNNQRWVHLPLTICEAL 173

Query: 197 REXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALARWLVTLQEGDG 256
           RE                                            A+ RWLV LQ+GDG
Sbjct: 174 REFNCFFPCRSSCMSSEKEKEKGGGGGVEGGGHGMMREGSCGNTNNAVGRWLVALQDGDG 233

Query: 257 KGRGIXXXXXXXXXXXXXXXXXXXXXXXRSQNRSQRRHVFEDIDIDLV--XXXXXXXXXX 314
           KGRGI                       R ++ SQRRHVFEDID+DLV            
Sbjct: 234 KGRGI-----------ELVMEEEMEVSGRERSNSQRRHVFEDIDVDLVVGEEEQKKHEEV 282

Query: 315 XXXXXXXXXRVSICIPPKNALLLMRCRSDPVKMAALANRFWESPLKK 361
                    RVSICIPPKNALLLMRCRSDPVKMAALANRFWESP+ K
Sbjct: 283 VGGEEEEKARVSICIPPKNALLLMRCRSDPVKMAALANRFWESPVHK 329



 Score =  165 bits (418), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/171 (58%), Positives = 103/171 (60%), Gaps = 27/171 (15%)

Query: 568 PESKEPETGSK-----KETLPECLLLMMCEPKLSMEVSKETWVCSTDFIRRLP------- 615
           PESKE E GSK     +E LPECLLLMMCEPKLSMEVSKETWVCSTDFIR LP       
Sbjct: 465 PESKERENGSKCQEREREGLPECLLLMMCEPKLSMEVSKETWVCSTDFIRWLPERPAAGG 524

Query: 616 ------GKTAVKXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXIEQKLVGSH--NG 663
                 G+T  K                                   IEQKLVGS   NG
Sbjct: 525 GSKRVAGETFTKSKPKPKPPQPMMQLPRSSCSLPAAGGSAGVSMAAMIEQKLVGSKSGNG 584

Query: 664 YEPFVLTRCKSEPMRSAAKLAPEACFWNNRKLEPTAP---LGVGAQAGVGF 711
           YEPFVLTRCKSEPMRS+AKLAPEACFWNNRKLEP  P   LGVGA AGVGF
Sbjct: 585 YEPFVLTRCKSEPMRSSAKLAPEACFWNNRKLEPHPPAAQLGVGAPAGVGF 635


>Glyma13g34820.1 
          Length = 698

 Score =  236 bits (601), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 161/349 (46%), Positives = 169/349 (48%), Gaps = 56/349 (16%)

Query: 25  ELFVCFXXXXXXXXXXXXXXXXXXPSRGRDPPPQIXXXXXXXXXXXXNGSMKGG---QAS 81
           ELFVCF                  PSR RDPP QI            NGS+KGG   QAS
Sbjct: 14  ELFVCFTSRLSSSSMKLSSKSILSPSRSRDPP-QISLSSSLSRRLKSNGSIKGGGGGQAS 72

Query: 82  PMFPTNGKRRGCG--FENPEPSSPKVTCIGQVRVKTKKQGKKMRARSKRRGEASFRKVAE 139
           PMFPT G  +  G  FENPEPSSPKVTCIGQVRVKTKKQGKKMRARSKRRGEASFRK   
Sbjct: 73  PMFPTGGGGKRRGCGFENPEPSSPKVTCIGQVRVKTKKQGKKMRARSKRRGEASFRK--- 129

Query: 140 MQGFQXXXXXXXXPDLTRQNSQSSFGFQNHSQSLQQECLKHR-NQRWVHLPLTICEALRE 198
                                             QQ CLKHR NQRWVHLPLTICEALRE
Sbjct: 130 --------------------------------GEQQNCLKHRNNQRWVHLPLTICEALRE 157

Query: 199 XX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALARWLVTLQE 253
                                                             + RWLV LQ+
Sbjct: 158 FSCFFPCRSSCMSTEKEEKGGGVEGGGHGMMMREGSCGINNNNNNNNNNNVGRWLVALQD 217

Query: 254 GDGKGRGIXXXXXXXXXXXXXXXXXXXXXXXRSQNRSQRRHVFEDIDIDLVX-XXXXXXX 312
           GDGKGRGI                         ++ SQRRHVFEDID+DLV         
Sbjct: 218 GDGKGRGIELVMEEEMEVSGRERSV--------RSHSQRRHVFEDIDVDLVVGEEQEKKH 269

Query: 313 XXXXXXXXXXXRVSICIPPKNALLLMRCRSDPVKMAALANRFWESPLKK 361
                      RVSICIPPKNALLLMRCRSDPVKMAALANRFWESP+ K
Sbjct: 270 EELVGEEEEQARVSICIPPKNALLLMRCRSDPVKMAALANRFWESPVHK 318



 Score =  167 bits (424), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/178 (56%), Positives = 106/178 (59%), Gaps = 26/178 (14%)

Query: 557 PTHEGSGPVNGPESKEPETGSKKE-----TLPECLLLMMCEPKLSMEVSKETWVCSTDFI 611
           PT E   P + PES E E GSK+E      LPECLLLMMCEPKLSMEVSKETWVCSTDFI
Sbjct: 524 PTRE---PNSDPESMERENGSKREERDREALPECLLLMMCEPKLSMEVSKETWVCSTDFI 580

Query: 612 RRLPGKTAVKXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXIEQKLV 658
           R LP +TA                                              IEQKL+
Sbjct: 581 RWLPERTAAGGGNRVAAETLAKSKPKPKPMMQPPRSSCSFPAARGGAGVSMAAMIEQKLM 640

Query: 659 GSH--NGYEPFVLTRCKSEPMRSAAKLAPEACFWNNRKLEPTAP---LGVGAQAGVGF 711
           GS   NGYEPFVLTRCKSEPMRS+AKLAPEACFWNNRKLEP  P   LGVGA AG+GF
Sbjct: 641 GSKSGNGYEPFVLTRCKSEPMRSSAKLAPEACFWNNRKLEPHPPAAQLGVGAPAGIGF 698