Miyakogusa Predicted Gene

Lj0g3v0091599.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091599.1 Non Chatacterized Hit- tr|I1MPT8|I1MPT8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13099
PE,89.43,0,RIBOSOMALL6,Ribosomal protein L6, bacterial-type; SUBFAMILY
NOT NAMED,NULL; 60S/50S RIBOSOMAL PROTEI,CUFF.5000.1
         (227 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g31250.1                                                       413   e-116
Glyma09g25500.1                                                       409   e-114
Glyma06g36460.1                                                        88   8e-18
Glyma10g34090.1                                                        86   3e-17
Glyma20g33490.1                                                        86   5e-17
Glyma12g30020.1                                                        78   7e-15

>Glyma16g31250.1 
          Length = 226

 Score =  413 bits (1062), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/227 (89%), Positives = 216/227 (95%), Gaps = 1/227 (0%)

Query: 1   MASTVTSSFQISNLKSGFLGERNKFRGSSVPSAAHVGFSRKTTECKESRIGKQPVDVPSN 60
           MAS+VTSSF+ISNLKS F+GE NK R SSVP  AHVGF+RKT ECKESRIGKQP+ VPSN
Sbjct: 1   MASSVTSSFRISNLKSVFVGETNKLRVSSVP-GAHVGFNRKTVECKESRIGKQPIPVPSN 59

Query: 61  VTIKLEGQDIAVKGPLGELALSYPREVLVEREESGALRVKKAVETRRANQMHGLFRTLTD 120
           VT+KLEGQDI VKGPLGELAL+YPREVLVEREESG LRVKKAVETRRANQMHGLFRTLTD
Sbjct: 60  VTVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTD 119

Query: 121 NLVVGVSKGFEKKLQLVGVGYRATVEGNDVVLNLGFSHPVRMTIPDGLKVKVEENTRITV 180
           NLV+GVSKGF+KKLQLVGVGYRA VEGN+VVLNLGFSHPV+MTIPDGLKVKVEENTRITV
Sbjct: 120 NLVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITV 179

Query: 181 SGYDKSEIGQFAASIRRWRPPEPYKGKGVKYADEIVRRKEGKAGKKK 227
           SGYDKSE+GQFAASIR+WRPPEPYKGKGVKYADEIVRRKEGKAGKKK
Sbjct: 180 SGYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIVRRKEGKAGKKK 226


>Glyma09g25500.1 
          Length = 226

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 201/227 (88%), Positives = 213/227 (93%), Gaps = 1/227 (0%)

Query: 1   MASTVTSSFQISNLKSGFLGERNKFRGSSVPSAAHVGFSRKTTECKESRIGKQPVDVPSN 60
           M S+VTSSF+ISNL S F+GE NKFR S+VP  AHVGF RKT ECKESRIGKQP+ VPSN
Sbjct: 1   MTSSVTSSFRISNLNSVFVGETNKFRVSTVP-GAHVGFIRKTVECKESRIGKQPIPVPSN 59

Query: 61  VTIKLEGQDIAVKGPLGELALSYPREVLVEREESGALRVKKAVETRRANQMHGLFRTLTD 120
           VT+KLEGQDI VKGPLGELALSYPREVLVEREESG LRVKKAVETRRANQMHGLFRTLTD
Sbjct: 60  VTVKLEGQDIQVKGPLGELALSYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTD 119

Query: 121 NLVVGVSKGFEKKLQLVGVGYRATVEGNDVVLNLGFSHPVRMTIPDGLKVKVEENTRITV 180
           NLV+GVSKGFEKKLQLVGVGYRA VEGN+VVLNLGFSHPV+M IPDGLKVKVEENTRITV
Sbjct: 120 NLVIGVSKGFEKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMIIPDGLKVKVEENTRITV 179

Query: 181 SGYDKSEIGQFAASIRRWRPPEPYKGKGVKYADEIVRRKEGKAGKKK 227
           SGYDKSE+GQFAASIR+WRPPEPYKGKGVKYADE+VRRKEGKAGKKK
Sbjct: 180 SGYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEVVRRKEGKAGKKK 226


>Glyma06g36460.1 
          Length = 102

 Score = 87.8 bits (216), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 40/89 (44%), Positives = 59/89 (66%), Gaps = 2/89 (2%)

Query: 130 FEKKLQLVGVGYRATVE--GNDVVLNLGFSHPVRMTIPDGLKVKVEENTRITVSGYDKSE 187
           F + L++VGVGY+A  E  G  + L LG+SH V +T+P  ++V   +N  I  +G DK  
Sbjct: 5   FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELTVPPAVRVFCFKNNVICCTGIDKQR 64

Query: 188 IGQFAASIRRWRPPEPYKGKGVKYADEIV 216
           + QFAA++R  +PPE YKGKG+ Y DE++
Sbjct: 65  VHQFAATVRTCKPPEVYKGKGIMYVDEVI 93


>Glyma10g34090.1 
          Length = 102

 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 2/89 (2%)

Query: 130 FEKKLQLVGVGYRATVE--GNDVVLNLGFSHPVRMTIPDGLKVKVEENTRITVSGYDKSE 187
           F + L++VGVGY+A  E  G  + L LG+SH V + +P  ++V   +N  I  +G DK  
Sbjct: 5   FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHEVELAVPPAVRVFCFKNNVICCTGIDKQR 64

Query: 188 IGQFAASIRRWRPPEPYKGKGVKYADEIV 216
           + QFAA++R  +PPE YKGKG+ Y DE++
Sbjct: 65  VHQFAATVRTCKPPEVYKGKGIMYVDEVI 93


>Glyma20g33490.1 
          Length = 137

 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 2/89 (2%)

Query: 130 FEKKLQLVGVGYRATVE--GNDVVLNLGFSHPVRMTIPDGLKVKVEENTRITVSGYDKSE 187
           F + L++VGVGY+A  E  G  + L LG+SH V + +P  ++V   +N  I  +G DK  
Sbjct: 40  FFRFLKIVGVGYKARAEAAGRLLYLKLGYSHDVELAVPPAVRVFCFKNNVICCTGIDKQR 99

Query: 188 IGQFAASIRRWRPPEPYKGKGVKYADEIV 216
           + QFAA++R  +PPE YKGKG+ Y DE++
Sbjct: 100 VHQFAATVRTCKPPEVYKGKGLMYVDEVI 128


>Glyma12g30020.1 
          Length = 78

 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/78 (58%), Positives = 50/78 (64%), Gaps = 19/78 (24%)

Query: 28  SSVPSAAHVGFSRKTTECKESRIGKQPVDVPSNVTIKLEGQDIAVKGPLGELALSYPREV 87
           S+VP  AHVGF RKT E                   KLE  DI VKGPLGE+ALSYPREV
Sbjct: 3   STVP-GAHVGFIRKTVE------------------FKLEEHDIQVKGPLGEVALSYPREV 43

Query: 88  LVEREESGALRVKKAVET 105
           LVEREESG LRVKKA++ 
Sbjct: 44  LVEREESGTLRVKKALDV 61