Miyakogusa Predicted Gene

Lj0g3v0091559.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091559.1 tr|Q9SRQ0|Q9SRQ0_ARATH T21P5.12 protein
OS=Arabidopsis thaliana GN=T21P5.12 PE=2
SV=1,55.65,2e-19,coiled-coil,NULL; GLIOMA TUMOR SUPPRESSOR CANDIDATE
REGION GENE 1,NULL; seg,NULL,CUFF.4989.1
         (157 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g35700.1                                                        98   3e-21
Glyma12g01660.1                                                        97   5e-21

>Glyma09g35700.1 
          Length = 378

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/117 (48%), Positives = 59/117 (50%), Gaps = 16/117 (13%)

Query: 51  AAAISRFPSNIDAHLR-----------XXXXXXXXXXXXXXXXXXXXXXXXXSNHLXXXX 99
           AAAISRFPSNIDAHLR                                    SNHL    
Sbjct: 56  AAAISRFPSNIDAHLRPIRPLNLQQNPNPNPNLNPAPNPNPNPILNLHQNPNSNHLPPQQ 115

Query: 100 XXXXXXXXXXXXXXXXKMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACERFI 156
                           K+VRPGN MELQMAYQDAWRVCHPDFKRPFSSLEDACER +
Sbjct: 116 QPPQQQQQQQQ-----KIVRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLL 167


>Glyma12g01660.1 
          Length = 368

 Score = 97.4 bits (241), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 59/115 (51%), Gaps = 16/115 (13%)

Query: 51  AAAISRFPSNIDAHLR---------XXXXXXXXXXXXXXXXXXXXXXXXXSNHLXXXXXX 101
           AAAISRFPSNIDAHLR                                  SNHL      
Sbjct: 50  AAAISRFPSNIDAHLRPIRPLNLQQNPNPSPNPAPNPNPNPLINLHQNPNSNHLPPPQQP 109

Query: 102 XXXXXXXXXXXXXXKMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACERFI 156
                         K++RPGN MELQMAYQDAWRVCHPDFKRPFSSLEDACER +
Sbjct: 110 SQQQQQQ-------KIIRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLL 157