Miyakogusa Predicted Gene

Lj0g3v0090789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0090789.1 tr|G7I9H7|G7I9H7_MEDTR Lon protease homolog
OS=Medicago truncatula GN=MTR_1g084020 PE=3 SV=1,78.95,0.0000000002,no
description,NULL; UNCHARACTERIZED PROTEIN YTBQ,NULL; NAD DEPENDENT
EPIMERASE/DEHYDRATASE,NULL; se,CUFF.4923.1
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23010.1                                                        69   2e-12
Glyma10g28840.1                                                        69   2e-12
Glyma01g37270.1                                                        66   2e-11
Glyma11g08020.1                                                        66   2e-11

>Glyma20g23010.1 
          Length = 972

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/38 (78%), Positives = 36/38 (94%)

Query: 124 MKALQESQERQAPYAGAFLVKDEPDADPSVVSSSNTEK 161
           + ALQES+ERQAPYAGAFL+KDEP+ADPS VSSS+T+K
Sbjct: 120 LAALQESRERQAPYAGAFLLKDEPEADPSAVSSSDTDK 157


>Glyma10g28840.1 
          Length = 938

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/38 (78%), Positives = 36/38 (94%)

Query: 124 MKALQESQERQAPYAGAFLVKDEPDADPSVVSSSNTEK 161
           + ALQES+ERQAPYAGAFL+KDEP+ADPSVVSSS+ +K
Sbjct: 119 LAALQESRERQAPYAGAFLLKDEPEADPSVVSSSDADK 156


>Glyma01g37270.1 
          Length = 365

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 19/106 (17%)

Query: 20  CNGI---------------RKITRAVGRLKIGLQSKLVLGNLQASRDWGLAGVCRAVVVK 64
           CNGI               RKITRAVGR+K+GLQSKL LGNLQASRDWG AG      V+
Sbjct: 200 CNGILFNHESPRRGENFVTRKITRAVGRIKVGLQSKLFLGNLQASRDWGFAGDY----VE 255

Query: 65  VQSLLLNLLRPSRFSNPRHPHKQQQRVGQILWYSSSRFWHYHCIIN 110
              L+L   +P  +          +   ++ +      W  H +I+
Sbjct: 256 AMWLMLQQDKPDDYVVATEESHTVEEFLEVAFGYVGLNWRDHVVID 301


>Glyma11g08020.1 
          Length = 365

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 19/106 (17%)

Query: 20  CNGI---------------RKITRAVGRLKIGLQSKLVLGNLQASRDWGLAGVCRAVVVK 64
           CNGI               RKITRAVGR+K+GLQSKL LGNLQASRDWG AG      V+
Sbjct: 200 CNGILFNHESPRRGENFVTRKITRAVGRIKVGLQSKLFLGNLQASRDWGFAGDY----VE 255

Query: 65  VQSLLLNLLRPSRFSNPRHPHKQQQRVGQILWYSSSRFWHYHCIIN 110
              L+L   +P  +          +   ++ +      W  H +I+
Sbjct: 256 AMWLMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWRDHVVID 301