Miyakogusa Predicted Gene

Lj0g3v0089459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0089459.1 tr|G7IHS5|G7IHS5_MEDTR Protein
farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
OS,83.28,0,PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT,NULL; PROTEIN
FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANY,CUFF.4824.1
         (329 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g41870.2                                                       563   e-160
Glyma15g03560.2                                                       551   e-157
Glyma13g41870.1                                                       550   e-156
Glyma15g03560.1                                                       541   e-154
Glyma13g41870.4                                                       378   e-105
Glyma13g41870.3                                                       378   e-105
Glyma06g10210.1                                                        88   2e-17
Glyma04g10240.1                                                        83   5e-16

>Glyma13g41870.2 
          Length = 340

 Score =  563 bits (1450), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/334 (79%), Positives = 298/334 (89%), Gaps = 11/334 (3%)

Query: 2   ESEEERVRLRDRAEWSDVTPVPQNDGPNPVVPISYTEDFAEVMDYFRAIYLANEHSSRAL 61
           E E++RV LR+RAEWSDVTP+PQNDGPNPVVPI YTEDF++VMDYFRA+YLA+E S RAL
Sbjct: 3   EGEQQRVPLRERAEWSDVTPLPQNDGPNPVVPIQYTEDFSQVMDYFRAVYLADERSPRAL 62

Query: 62  SLTAEVIHFNAGNYTVWHFRRLLLESLKVDLHGELEYVERVASANSKNYQIWHHRRWVAE 121
           +LTAE + FN+GNYTVWHFRRLLLESLKVDL+ EL++VER+A+ NSKNYQ+WHHRRWVAE
Sbjct: 63  ALTAEAVQFNSGNYTVWHFRRLLLESLKVDLNAELDFVERMAAGNSKNYQMWHHRRWVAE 122

Query: 122 KLGVEARHIELEFTRKILSVDAKHYHAWSHRQWVLQTLGGWEDELNYCSQLLEEDIFNNS 181
           KLG EAR  ELEFT+KILSVDAKHYHAWSHRQWVLQ LGGWEDELNYC++LL+EDIFNNS
Sbjct: 123 KLGPEARKNELEFTKKILSVDAKHYHAWSHRQWVLQALGGWEDELNYCTELLKEDIFNNS 182

Query: 182 AWNQRYFVISRSPFLGGLKAMRESEVLYTVEAIIASPENESSWRYLRGLFKGETALYVND 241
           AWNQRYFVI+RSPFLGGLKAMRESEVLYT+EAIIA PENESSWRYLRGL+KGET  +VND
Sbjct: 183 AWNQRYFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRGLYKGETTSWVND 242

Query: 242 PQVPSVCLKILNTKSNYLFALSTLLDLISLGYQPNEDFRDAIEAIKTSDFDKQDHD---- 297
           PQV SVCLKIL TKSNY+FALST+LDLI  GY PNEDFRDAI+A+KT+D DKQ+ D    
Sbjct: 243 PQVSSVCLKILRTKSNYVFALSTILDLICFGYLPNEDFRDAIDALKTADMDKQNLDDNEK 302

Query: 298 -------IARNICSILEQVDPIRANYWIWRKCRV 324
                  IA+NICSILEQVDPIR NYWIWRK R+
Sbjct: 303 GEQQNLNIAQNICSILEQVDPIRTNYWIWRKSRL 336


>Glyma15g03560.2 
          Length = 346

 Score =  551 bits (1420), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 261/334 (78%), Positives = 296/334 (88%), Gaps = 11/334 (3%)

Query: 2   ESEEERVRLRDRAEWSDVTPVPQNDGPNPVVPISYTEDFAEVMDYFRAIYLANEHSSRAL 61
           E  ++RV LR+R EWSDVTPVPQNDGPNPVVPI YTE+F+EVMDYFRA+YL +E S RAL
Sbjct: 9   EEVQQRVPLRERVEWSDVTPVPQNDGPNPVVPIQYTEEFSEVMDYFRAVYLTDERSPRAL 68

Query: 62  SLTAEVIHFNAGNYTVWHFRRLLLESLKVDLHGELEYVERVASANSKNYQIWHHRRWVAE 121
           +LTAE + FN+GNYTVWHFRRLLLESLKVDL+ ELE+VER+A+ NSKNYQ+WHHRRWVAE
Sbjct: 69  ALTAEAVQFNSGNYTVWHFRRLLLESLKVDLNDELEFVERMAAGNSKNYQMWHHRRWVAE 128

Query: 122 KLGVEARHIELEFTRKILSVDAKHYHAWSHRQWVLQTLGGWEDELNYCSQLLEEDIFNNS 181
           KLG EAR+ ELEFT+KILSVDAKHYHAWSHRQW LQTLGGWEDELNYC++LL+EDIFNNS
Sbjct: 129 KLGPEARNNELEFTKKILSVDAKHYHAWSHRQWALQTLGGWEDELNYCTELLKEDIFNNS 188

Query: 182 AWNQRYFVISRSPFLGGLKAMRESEVLYTVEAIIASPENESSWRYLRGLFKGETALYVND 241
           AWNQRYFVI+RSPFLGGLKAMRESEVLYT+EAIIA PENESSWRYLRGL+KGET  +VND
Sbjct: 189 AWNQRYFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRGLYKGETTSWVND 248

Query: 242 PQVPSVCLKILNTKSNYLFALSTLLDLISLGYQPNEDFRDAIEAIKTSDF---------- 291
           PQV SVCLKIL TKSNY+FALST+LDLI  GYQPNED RDAI+A+KT+D           
Sbjct: 249 PQVSSVCLKILRTKSNYVFALSTILDLICFGYQPNEDIRDAIDALKTADMDKQDLDDDEK 308

Query: 292 -DKQDHDIARNICSILEQVDPIRANYWIWRKCRV 324
            ++Q+ +IARNICSIL+QVDPIR NYWIWRK R+
Sbjct: 309 GEQQNLNIARNICSILKQVDPIRTNYWIWRKSRL 342


>Glyma13g41870.1 
          Length = 362

 Score =  550 bits (1416), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 265/356 (74%), Positives = 298/356 (83%), Gaps = 33/356 (9%)

Query: 2   ESEEERVRLRDRAEWSDVTPVPQNDGPNPVVPISYTEDFAEVMDYFRAIYLANEHSSRAL 61
           E E++RV LR+RAEWSDVTP+PQNDGPNPVVPI YTEDF++VMDYFRA+YLA+E S RAL
Sbjct: 3   EGEQQRVPLRERAEWSDVTPLPQNDGPNPVVPIQYTEDFSQVMDYFRAVYLADERSPRAL 62

Query: 62  SLTAEVIHFNAGNYTV----------------------WHFRRLLLESLKVDLHGELEYV 99
           +LTAE + FN+GNYTV                      WHFRRLLLESLKVDL+ EL++V
Sbjct: 63  ALTAEAVQFNSGNYTVCQVRIKCFRLHLFLFISSLLQVWHFRRLLLESLKVDLNAELDFV 122

Query: 100 ERVASANSKNYQIWHHRRWVAEKLGVEARHIELEFTRKILSVDAKHYHAWSHRQWVLQTL 159
           ER+A+ NSKNYQ+WHHRRWVAEKLG EAR  ELEFT+KILSVDAKHYHAWSHRQWVLQ L
Sbjct: 123 ERMAAGNSKNYQMWHHRRWVAEKLGPEARKNELEFTKKILSVDAKHYHAWSHRQWVLQAL 182

Query: 160 GGWEDELNYCSQLLEEDIFNNSAWNQRYFVISRSPFLGGLKAMRESEVLYTVEAIIASPE 219
           GGWEDELNYC++LL+EDIFNNSAWNQRYFVI+RSPFLGGLKAMRESEVLYT+EAIIA PE
Sbjct: 183 GGWEDELNYCTELLKEDIFNNSAWNQRYFVITRSPFLGGLKAMRESEVLYTIEAIIAYPE 242

Query: 220 NESSWRYLRGLFKGETALYVNDPQVPSVCLKILNTKSNYLFALSTLLDLISLGYQPNEDF 279
           NESSWRYLRGL+KGET  +VNDPQV SVCLKIL TKSNY+FALST+LDLI  GY PNEDF
Sbjct: 243 NESSWRYLRGLYKGETTSWVNDPQVSSVCLKILRTKSNYVFALSTILDLICFGYLPNEDF 302

Query: 280 RDAIEAIKTSDFDKQDHD-----------IARNICSILEQVDPIRANYWIWRKCRV 324
           RDAI+A+KT+D DKQ+ D           IA+NICSILEQVDPIR NYWIWRK R+
Sbjct: 303 RDAIDALKTADMDKQNLDDNEKGEQQNLNIAQNICSILEQVDPIRTNYWIWRKSRL 358


>Glyma15g03560.1 
          Length = 358

 Score =  541 bits (1394), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/346 (75%), Positives = 296/346 (85%), Gaps = 23/346 (6%)

Query: 2   ESEEERVRLRDRAEWSDVTPVPQNDGPNPVVPISYTEDFAEVMDYFRAIYLANEHSSRAL 61
           E  ++RV LR+R EWSDVTPVPQNDGPNPVVPI YTE+F+EVMDYFRA+YL +E S RAL
Sbjct: 9   EEVQQRVPLRERVEWSDVTPVPQNDGPNPVVPIQYTEEFSEVMDYFRAVYLTDERSPRAL 68

Query: 62  SLTAEVIHFNAGNYTVWHFRRLLLESLKVDLHGELEYVERVASANSKNYQIW-------- 113
           +LTAE + FN+GNYTVWHFRRLLLESLKVDL+ ELE+VER+A+ NSKNYQ+W        
Sbjct: 69  ALTAEAVQFNSGNYTVWHFRRLLLESLKVDLNDELEFVERMAAGNSKNYQMWCDALLCSF 128

Query: 114 ----HHRRWVAEKLGVEARHIELEFTRKILSVDAKHYHAWSHRQWVLQTLGGWEDELNYC 169
               HHRRWVAEKLG EAR+ ELEFT+KILSVDAKHYHAWSHRQW LQTLGGWEDELNYC
Sbjct: 129 FHTLHHRRWVAEKLGPEARNNELEFTKKILSVDAKHYHAWSHRQWALQTLGGWEDELNYC 188

Query: 170 SQLLEEDIFNNSAWNQRYFVISRSPFLGGLKAMRESEVLYTVEAIIASPENESSWRYLRG 229
           ++LL+EDIFNNSAWNQRYFVI+RSPFLGGLKAMRESEVLYT+EAIIA PENESSWRYLRG
Sbjct: 189 TELLKEDIFNNSAWNQRYFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRG 248

Query: 230 LFKGETALYVNDPQVPSVCLKILNTKSNYLFALSTLLDLISLGYQPNEDFRDAIEAIKTS 289
           L+KGET  +VNDPQV SVCLKIL TKSNY+FALST+LDLI  GYQPNED RDAI+A+KT+
Sbjct: 249 LYKGETTSWVNDPQVSSVCLKILRTKSNYVFALSTILDLICFGYQPNEDIRDAIDALKTA 308

Query: 290 DF-----------DKQDHDIARNICSILEQVDPIRANYWIWRKCRV 324
           D            ++Q+ +IARNICSIL+QVDPIR NYWIWRK R+
Sbjct: 309 DMDKQDLDDDEKGEQQNLNIARNICSILKQVDPIRTNYWIWRKSRL 354


>Glyma13g41870.4 
          Length = 243

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/226 (80%), Positives = 198/226 (87%), Gaps = 11/226 (4%)

Query: 110 YQIWHHRRWVAEKLGVEARHIELEFTRKILSVDAKHYHAWSHRQWVLQTLGGWEDELNYC 169
           Y+ WHHRRWVAEKLG EAR  ELEFT+KILSVDAKHYHAWSHRQWVLQ LGGWEDELNYC
Sbjct: 14  YKPWHHRRWVAEKLGPEARKNELEFTKKILSVDAKHYHAWSHRQWVLQALGGWEDELNYC 73

Query: 170 SQLLEEDIFNNSAWNQRYFVISRSPFLGGLKAMRESEVLYTVEAIIASPENESSWRYLRG 229
           ++LL+EDIFNNSAWNQRYFVI+RSPFLGGLKAMRESEVLYT+EAIIA PENESSWRYLRG
Sbjct: 74  TELLKEDIFNNSAWNQRYFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRG 133

Query: 230 LFKGETALYVNDPQVPSVCLKILNTKSNYLFALSTLLDLISLGYQPNEDFRDAIEAIKTS 289
           L+KGET  +VNDPQV SVCLKIL TKSNY+FALST+LDLI  GY PNEDFRDAI+A+KT+
Sbjct: 134 LYKGETTSWVNDPQVSSVCLKILRTKSNYVFALSTILDLICFGYLPNEDFRDAIDALKTA 193

Query: 290 DFDKQDHD-----------IARNICSILEQVDPIRANYWIWRKCRV 324
           D DKQ+ D           IA+NICSILEQVDPIR NYWIWRK R+
Sbjct: 194 DMDKQNLDDNEKGEQQNLNIAQNICSILEQVDPIRTNYWIWRKSRL 239


>Glyma13g41870.3 
          Length = 243

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 181/226 (80%), Positives = 198/226 (87%), Gaps = 11/226 (4%)

Query: 110 YQIWHHRRWVAEKLGVEARHIELEFTRKILSVDAKHYHAWSHRQWVLQTLGGWEDELNYC 169
           Y+ WHHRRWVAEKLG EAR  ELEFT+KILSVDAKHYHAWSHRQWVLQ LGGWEDELNYC
Sbjct: 14  YKPWHHRRWVAEKLGPEARKNELEFTKKILSVDAKHYHAWSHRQWVLQALGGWEDELNYC 73

Query: 170 SQLLEEDIFNNSAWNQRYFVISRSPFLGGLKAMRESEVLYTVEAIIASPENESSWRYLRG 229
           ++LL+EDIFNNSAWNQRYFVI+RSPFLGGLKAMRESEVLYT+EAIIA PENESSWRYLRG
Sbjct: 74  TELLKEDIFNNSAWNQRYFVITRSPFLGGLKAMRESEVLYTIEAIIAYPENESSWRYLRG 133

Query: 230 LFKGETALYVNDPQVPSVCLKILNTKSNYLFALSTLLDLISLGYQPNEDFRDAIEAIKTS 289
           L+KGET  +VNDPQV SVCLKIL TKSNY+FALST+LDLI  GY PNEDFRDAI+A+KT+
Sbjct: 134 LYKGETTSWVNDPQVSSVCLKILRTKSNYVFALSTILDLICFGYLPNEDFRDAIDALKTA 193

Query: 290 DFDKQDHD-----------IARNICSILEQVDPIRANYWIWRKCRV 324
           D DKQ+ D           IA+NICSILEQVDPIR NYWIWRK R+
Sbjct: 194 DMDKQNLDDNEKGEQQNLNIAQNICSILEQVDPIRTNYWIWRKSRL 239


>Glyma06g10210.1 
          Length = 691

 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)

Query: 41  AEVMDYFRAIYLANEH----SSRALSLTAEVIHFNAGNYTVWHFRRL----LLESLKVDL 92
            E +   +A +LAN H    S  AL L+A+++  N   YT W++R+L     L +   D 
Sbjct: 21  TEKLRSVQAQFLANHHNHIYSKEALDLSAKLLEVNPECYTAWNYRKLAVQHFLSNSDSDP 80

Query: 93  HG----ELEYVERVASANSKNYQIWHHRRWVAEKLGVEARHIELEFTRKILSVDAKHYHA 148
           H     EL+ VE     N K+Y  WHHR+WV  K G  +   E+        +D +++HA
Sbjct: 81  HSIFDDELKLVENALRKNFKSYGAWHHRKWVLNK-GHSSIDNEMRLLNGFQKMDPRNFHA 139

Query: 149 WSHRQWVLQTLG-GWEDELNYCSQLLEEDIFNNSAWNQRYFVIS-----RSPFLGGLKAM 202
           W++R++V + +    EDEL Y  +++  +  N SAW+ R  ++S     ++      + +
Sbjct: 140 WNYRRFVAELMKRSDEDELKYTEEVIATNFSNYSAWHNRSVLLSNLLKRKAEGYFPKEKV 199

Query: 203 RESEVLYTVEAIIASPENESSWRY 226
            E E  +   AI   P+++S W Y
Sbjct: 200 LEEEFEHVHNAIFTDPDDQSGWFY 223


>Glyma04g10240.1 
          Length = 707

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 95/185 (51%), Gaps = 15/185 (8%)

Query: 56  HSSRALSLTAEVIHFNAGNYTVWHFRRL----LLESLKVDLHG----ELEYVERVASANS 107
           +S  AL ++A+++  N   YT W++R+L    LL +   D H     EL+ VE     N 
Sbjct: 56  YSKEALDVSAKLLEVNPECYTAWNYRKLAVQHLLSNSDSDPHSIFDDELKLVEIALRKNF 115

Query: 108 KNYQIWHHRRWVAEKLGVEARHIELEFTRKILSVDAKHYHAWSHRQWVLQTLG-GWEDEL 166
           K+Y  WHHR+WV  K G  +   E+        +D +++HAW++R++V + +    EDEL
Sbjct: 116 KSYGAWHHRKWVLSK-GHSSIDNEMRLLNGFQKMDPRNFHAWNYRRFVAELMKRSDEDEL 174

Query: 167 NYCSQLLEEDIFNNSAWNQRYFVIS-----RSPFLGGLKAMRESEVLYTVEAIIASPENE 221
            Y  +++  +  N SAW+ R  ++S     ++      + + E E  +   AI   P+++
Sbjct: 175 KYTEEVIGTNFSNYSAWHNRSVLLSNLLKRKAEGYFPKEKVLEGEFEHVHNAIFTDPDDQ 234

Query: 222 SSWRY 226
           S W Y
Sbjct: 235 SGWFY 239