Miyakogusa Predicted Gene
- Lj0g3v0089419.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0089419.1 Non Chatacterized Hit- tr|D7MVA0|D7MVA0_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,45.87,5e-19,N7-RELATED PROTEIN,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; no description,NULL; RNI-like,NULL,CUFF.4814.1
(115 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g29200.1 114 3e-26
Glyma15g09890.1 107 4e-24
Glyma02g36660.1 62 1e-10
Glyma02g36660.2 62 1e-10
Glyma04g10850.2 55 2e-08
Glyma04g10850.1 55 2e-08
Glyma06g10680.3 54 3e-08
Glyma06g10680.2 54 3e-08
Glyma06g10680.1 54 3e-08
>Glyma13g29200.1
Length = 311
Score = 114 bits (284), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Query: 1 MRLWKCLGITNKGLREAVTKLPMLEEFEISFKHLSKASLEFIGKYCPHLSVLKLNMKEVK 60
+RL C I+++GL E KLP LEE +IS +L+K LE IG+ CPHL LK NM+ +
Sbjct: 114 LRLACCYQISDEGLCEIAEKLPQLEELDISISNLTKDPLEAIGQCCPHLKTLKFNMEGYR 173
Query: 61 S--FKFDDQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
+ D++AFAIA+TMP L LQL GN+L+NEGLLAILDGCP L+ L
Sbjct: 174 RPHIECDEEAFAIAETMPGLHHLQLFGNKLTNEGLLAILDGCPLLESL 221
>Glyma15g09890.1
Length = 318
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 74/110 (67%), Gaps = 4/110 (3%)
Query: 1 MRLWKCLGITNKGLREAVTKLPMLEEFEISFKHL--SKASLEFIGKYCPHLSVLKLNMKE 58
+RL C I+++GL E +LP LEE +IS ++ LE +G+ C HL LK NMK
Sbjct: 120 LRLACCYQISDEGLCEIAKELPQLEELDISISSFNPTRDPLEAVGRCCRHLKTLKFNMKG 179
Query: 59 VKS--FKFDDQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
+ + D++AFAIA+TMP L LQL GN+L+NEGLLAILDGCPHL+ L
Sbjct: 180 YRRPHIECDEEAFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESL 229
>Glyma02g36660.1
Length = 306
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 18/120 (15%)
Query: 5 KCLGITNKGLREAVTKLPMLEEFEISFKH-LSKASLEFIGKYCPHLSVLKLNM------- 56
C +T+ + P L E +IS+ + ++ SL IG+ CP+L VLK N+
Sbjct: 127 SCPRVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLKRNLMNWLDPS 186
Query: 57 --KEVKSFKF--------DDQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
+ + + DD+A AIA +MP L QL++ ++L+ +GL +I GCP+L+ L
Sbjct: 187 QHRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPNLEFL 246
>Glyma02g36660.2
Length = 296
Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 18/119 (15%)
Query: 6 CLGITNKGLREAVTKLPMLEEFEISFKH-LSKASLEFIGKYCPHLSVLKLNM-------- 56
C +T+ + P L E +IS+ + ++ SL IG+ CP+L VLK N+
Sbjct: 118 CPRVTDDSISRIALSCPKLRELDISYCYEITHESLVLIGRNCPNLKVLKRNLMNWLDPSQ 177
Query: 57 -KEVKSFKF--------DDQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
+ + + DD+A AIA +MP L QL++ ++L+ +GL +I GCP+L+ L
Sbjct: 178 HRGIVPDDYLNACPQDGDDEAAAIANSMPGLEQLEIRFSKLTAKGLNSICQGCPNLEFL 236
>Glyma04g10850.2
Length = 321
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 11 NKGLREAVT-KLPMLEEFEISFK-HLSKASLEFIGKYCPHLSVLKLNMKEV----KSFKF 64
N + E + +L M+ ++S+ + +LE IGK C L L NM + K F+
Sbjct: 118 NDSIVEQIAGRLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTASKPFQ- 176
Query: 65 DDQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
DD+A+AIA TMP L+ L++ + +S G+L IL CP L+ L
Sbjct: 177 DDEAYAIASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFL 218
>Glyma04g10850.1
Length = 321
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 11 NKGLREAVT-KLPMLEEFEISFK-HLSKASLEFIGKYCPHLSVLKLNMKEV----KSFKF 64
N + E + +L M+ ++S+ + +LE IGK C L L NM + K F+
Sbjct: 118 NDSIVEQIAGRLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTASKPFQ- 176
Query: 65 DDQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
DD+A+AIA TMP L+ L++ + +S G+L IL CP L+ L
Sbjct: 177 DDEAYAIASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFL 218
>Glyma06g10680.3
Length = 321
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 11 NKGLREAVT-KLPMLEEFEISFK-HLSKASLEFIGKYCPHLSVLKLNMKEVKSFK---FD 65
N + E + +L M+ ++S+ + +LE IGK C L L NM + + + D
Sbjct: 118 NDSIVEQIAGRLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTAEKPHQD 177
Query: 66 DQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
D+A+AIA TMP L+ L++ + +S G+L IL CP L+ L
Sbjct: 178 DEAYAIASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFL 218
>Glyma06g10680.2
Length = 321
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 11 NKGLREAVT-KLPMLEEFEISFK-HLSKASLEFIGKYCPHLSVLKLNMKEVKSFK---FD 65
N + E + +L M+ ++S+ + +LE IGK C L L NM + + + D
Sbjct: 118 NDSIVEQIAGRLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTAEKPHQD 177
Query: 66 DQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
D+A+AIA TMP L+ L++ + +S G+L IL CP L+ L
Sbjct: 178 DEAYAIASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFL 218
>Glyma06g10680.1
Length = 321
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 11 NKGLREAVT-KLPMLEEFEISFK-HLSKASLEFIGKYCPHLSVLKLNMKEVKSFK---FD 65
N + E + +L M+ ++S+ + +LE IGK C L L NM + + + D
Sbjct: 118 NDSIVEQIAGRLSMISFLDVSYCIKIGPYALEMIGKNCKLLEGLCRNMHPLDTAEKPHQD 177
Query: 66 DQAFAIAKTMPHLRQLQLLGNRLSNEGLLAILDGCPHLDLL 106
D+A+AIA TMP L+ L++ + +S G+L IL CP L+ L
Sbjct: 178 DEAYAIASTMPKLKHLEMAYHLISTSGVLQILANCPKLEFL 218