Miyakogusa Predicted Gene

Lj0g3v0089039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0089039.1 tr|G7IK16|G7IK16_MEDTR Kinesin-like protein
OS=Medicago truncatula GN=MTR_2g010760 PE=3
SV=1,78.38,0.0000001,coiled-coil,NULL; seg,NULL,CUFF.4783.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g06880.1                                                        55   2e-08
Glyma13g32450.1                                                        54   3e-08
Glyma07g30580.1                                                        48   2e-06
Glyma08g06690.1                                                        46   8e-06

>Glyma15g06880.1 
          Length = 800

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/37 (75%), Positives = 31/37 (83%)

Query: 41  ENEMKMKMGELNEVISNLRMMISSLEERITKEERDKL 77
           ENEMK+K+ EL+E ISNLR  ISSLEERI KEE DKL
Sbjct: 143 ENEMKIKIAELDETISNLRAAISSLEERIAKEESDKL 179


>Glyma13g32450.1 
          Length = 764

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/37 (72%), Positives = 31/37 (83%)

Query: 41  ENEMKMKMGELNEVISNLRMMISSLEERITKEERDKL 77
           ENEMK+K+ EL+E ISNLR+ ISSLEERI KE  DKL
Sbjct: 107 ENEMKIKIAELDETISNLRVTISSLEERIAKEASDKL 143


>Glyma07g30580.1 
          Length = 756

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/37 (67%), Positives = 28/37 (75%)

Query: 41  ENEMKMKMGELNEVISNLRMMISSLEERITKEERDKL 77
           E EMK K+ EL E +S+LR  ISSLEERI KEE DKL
Sbjct: 104 ETEMKSKIEELEETVSDLRKTISSLEERIVKEESDKL 140


>Glyma08g06690.1 
          Length = 821

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 24/35 (68%), Positives = 27/35 (77%)

Query: 43  EMKMKMGELNEVISNLRMMISSLEERITKEERDKL 77
           EMK K+ EL E +S+LR  ISSLEERI KEE DKL
Sbjct: 172 EMKSKIEELEETVSDLRKTISSLEERIVKEESDKL 206