Miyakogusa Predicted Gene

Lj0g3v0087919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087919.1 Non Chatacterized Hit- tr|I1R7S0|I1R7S0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,47.42,0.00000000000005,seg,NULL; A_tha_TIGR01569: plant integral
membrane protein T,Uncharacterised protein family UPF0497,,CUFF.4700.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g30480.1                                                       134   4e-32
Glyma08g13620.1                                                       130   4e-31
Glyma15g22100.1                                                       107   4e-24
Glyma09g09990.1                                                        96   1e-20

>Glyma05g30480.1 
          Length = 194

 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 83/122 (68%), Gaps = 1/122 (0%)

Query: 1   MASENAEKLELGSSAVPDQTKPKKDWIXXXXXXXXXXXXXXXXXXXXXNKQSKNLVVATI 60
           MASEN +KLEL  SAVPD  KPKKDW+                     NKQ+K +VVATI
Sbjct: 1   MASENGDKLELAFSAVPDP-KPKKDWVILSLRVVAFFATASATLVMAFNKQTKGMVVATI 59

Query: 61  GTNPITATISAKFHHTPAFVFFVIANGIASVHNMVVIALDFLGPRFDNQGLYLTLIAIFD 120
           GTNP+T T++A F HTPAF+FFVI N IAS +N++VI ++ LGP++D +GL L LIAI D
Sbjct: 60  GTNPVTITLTAMFQHTPAFIFFVIVNAIASFYNLLVIGVEILGPQYDYKGLRLGLIAILD 119

Query: 121 MV 122
           ++
Sbjct: 120 VM 121


>Glyma08g13620.1 
          Length = 194

 Score =  130 bits (328), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 81/122 (66%), Gaps = 1/122 (0%)

Query: 1   MASENAEKLELGSSAVPDQTKPKKDWIXXXXXXXXXXXXXXXXXXXXXNKQSKNLVVATI 60
           MASEN +KLEL  S VPD  KPKKDW+                     NKQ+K++VVATI
Sbjct: 1   MASENGDKLELAFSVVPDP-KPKKDWVNLSLRVVAFLATASATLVMAFNKQTKSMVVATI 59

Query: 61  GTNPITATISAKFHHTPAFVFFVIANGIASVHNMVVIALDFLGPRFDNQGLYLTLIAIFD 120
           GTNP+T T++A F HTPAF FFVI N IAS +NMVVI ++ LGP++D + L L LIAI D
Sbjct: 60  GTNPVTITLTAMFQHTPAFTFFVIVNAIASFYNMVVIGVEILGPQYDYKELRLGLIAILD 119

Query: 121 MV 122
           ++
Sbjct: 120 VM 121


>Glyma15g22100.1 
          Length = 165

 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 64/74 (86%)

Query: 49  NKQSKNLVVATIGTNPITATISAKFHHTPAFVFFVIANGIASVHNMVVIALDFLGPRFDN 108
           NKQ+K+ VVAT+G+ PITAT++AKF+ TPAFVFFVIANG AS+HN+V+I ++ LGPR+D 
Sbjct: 23  NKQTKSFVVATVGSTPITATLAAKFNQTPAFVFFVIANGNASLHNLVMIVMEVLGPRYDY 82

Query: 109 QGLYLTLIAIFDMV 122
           +GL L LIAI DM+
Sbjct: 83  KGLRLALIAILDMM 96


>Glyma09g09990.1 
          Length = 169

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/75 (62%), Positives = 62/75 (82%), Gaps = 1/75 (1%)

Query: 49  NKQSKNLVVATIGTNPITATISAKFHHTPAFVFFVIANGIASVH-NMVVIALDFLGPRFD 107
           NKQ+K+ VVAT+G+ PITAT +AKF+ TPAFVFFVIANG A++H N+V+IA++ LG R+D
Sbjct: 23  NKQTKSFVVATVGSTPITATFAAKFNQTPAFVFFVIANGNAALHNNLVMIAMEILGTRYD 82

Query: 108 NQGLYLTLIAIFDMV 122
            +G  L LIAI DM+
Sbjct: 83  YKGPRLALIAILDMM 97