Miyakogusa Predicted Gene

Lj0g3v0087839.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087839.2 tr|Q9W0I7|Q9W0I7_DROME IP07275p OS=Drosophila
melanogaster GN=Psf1 PE=2 SV=2,32.38,3e-19,PARTNER OF SLD5,NULL;
PARTNER OF SLD5,GINS complex, subunit Psf1; Sld5,GINS
complex,CUFF.4694.2
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g16760.1                                                       315   2e-86
Glyma07g11860.1                                                       312   1e-85
Glyma11g25830.1                                                        75   4e-14

>Glyma04g16760.1 
          Length = 199

 Score =  315 bits (806), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 144/198 (72%), Positives = 176/198 (88%)

Query: 1   MYGRKACQLVKELAGGEKGQFTPFNSDLFEQVVAECSQHHLELQSLIRKIQDEGLDVQTA 60
           MYG KA QLVKE A GEKGQ T +N+DL  +VVAEC+QHHL+ QSLIRK+Q+EGLD+QTA
Sbjct: 1   MYGSKASQLVKEFASGEKGQLTTYNNDLIREVVAECTQHHLDFQSLIRKMQEEGLDIQTA 60

Query: 61  RNADHYGALIHHLSLVRNKRCLMAYTYNRAENLRSLVWKVGHGLPQEIEEKICHSEKEYF 120
           +NADHYGALIHHL++VRNKRCLMAY YNRAE +R+L+WK+GH LPQEI+ K+C++E+E+F
Sbjct: 61  KNADHYGALIHHLAVVRNKRCLMAYMYNRAEIIRNLLWKIGHVLPQEIKVKLCNTEEEHF 120

Query: 121 KKHSSALKSYMSQLLVDLTVDMVPPKDPCIQVRVLEDIGEGIVLSDDKTYNLALQSIHLL 180
           K HS ALK+YM ++ VDLTVDMVPPKDP I+VRV++DIGEGI+LSDDK+ N AL S+HLL
Sbjct: 121 KNHSKALKNYMLKVEVDLTVDMVPPKDPYIKVRVIDDIGEGILLSDDKSANFALHSMHLL 180

Query: 181 KRTDAEQFIARGLMEEIT 198
           KRTDAEQFIA+G MEE+T
Sbjct: 181 KRTDAEQFIAQGKMEELT 198


>Glyma07g11860.1 
          Length = 199

 Score =  312 bits (800), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 143/197 (72%), Positives = 174/197 (88%)

Query: 1   MYGRKACQLVKELAGGEKGQFTPFNSDLFEQVVAECSQHHLELQSLIRKIQDEGLDVQTA 60
           MYG KA QLVKE A GEKGQ T +N+DL  +VVAEC+QHHL+ QSLIRK+Q+EGLD+QTA
Sbjct: 1   MYGSKASQLVKEFASGEKGQLTTYNNDLIREVVAECTQHHLDFQSLIRKMQEEGLDIQTA 60

Query: 61  RNADHYGALIHHLSLVRNKRCLMAYTYNRAENLRSLVWKVGHGLPQEIEEKICHSEKEYF 120
           +NADHYGALIHHL++VRNKRCLMAY YNRAE +R+L+WK+GH LPQEI+ K+C +E+E+F
Sbjct: 61  KNADHYGALIHHLAVVRNKRCLMAYMYNRAEIIRNLLWKIGHMLPQEIKVKLCSTEEEHF 120

Query: 121 KKHSSALKSYMSQLLVDLTVDMVPPKDPCIQVRVLEDIGEGIVLSDDKTYNLALQSIHLL 180
           K HS ALK+YM ++ VDLTVDMVPPKDP I+VRV++DIGEGI+LSDDK+ N AL S+HLL
Sbjct: 121 KNHSKALKNYMLKVEVDLTVDMVPPKDPYIKVRVIDDIGEGILLSDDKSANFALHSMHLL 180

Query: 181 KRTDAEQFIARGLMEEI 197
           KRTDAEQFIA+G MEE+
Sbjct: 181 KRTDAEQFIAQGKMEEL 197


>Glyma11g25830.1 
          Length = 61

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 52/80 (65%), Gaps = 19/80 (23%)

Query: 102 HGLPQEIEEKICHSEKEYFKKHSSALKSYMSQLLVDLTVDMVPPKDPCIQVRVLEDIGEG 161
           H LPQEI+ K+C++E+E+F KHS ALK YM                    +RV++DIGEG
Sbjct: 1   HVLPQEIKVKLCNTEEEHFTKHSKALKYYM-------------------WLRVIDDIGEG 41

Query: 162 IVLSDDKTYNLALQSIHLLK 181
           I+LSDDK+ N AL S+HLLK
Sbjct: 42  IMLSDDKSANFALHSMHLLK 61