Miyakogusa Predicted Gene

Lj0g3v0087829.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087829.1 Non Chatacterized Hit- tr|F6HVB5|F6HVB5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,81.18,0,seg,NULL; coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; THO
COMPLEX SUBUNIT 1,NULL; efThoc1,THO comple,CUFF.4693.1
         (573 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g16810.1                                                       725   0.0  
Glyma04g16840.1                                                       275   8e-74

>Glyma04g16810.1 
          Length = 436

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/404 (85%), Positives = 363/404 (89%)

Query: 170 MFLAHFFPLSERSALNIKGVFNTSNVTKYEKEPLEGICIDFNFYETFWGLQEYFSNPSSI 229
           MFLAHFFPLSERSALNIKGVFNTSN TKYEKEPLEGICIDFNFY+TFWGLQEYFSNP+SI
Sbjct: 1   MFLAHFFPLSERSALNIKGVFNTSNETKYEKEPLEGICIDFNFYQTFWGLQEYFSNPTSI 60

Query: 230 IHAPAKWKKFTSSLSVVLNTFEAQPLSDEEGDANNLEEETVNFSIKYLTSSKLMGLELKD 289
            HAPAKW+KFT SLSVVLNTFEAQPLSDEEGDANNLEEE VNFSIKYLTSSKLMGLELKD
Sbjct: 61  SHAPAKWQKFTLSLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKD 120

Query: 290 PSFRRHVLVQCLILFDYLKAPGKTDKDSPSENMKEEITSCEERVKKLLELTPPKGKEFLH 349
           PSFRRHVLVQCLILFDYLKAPGK DKD PSENMKEEITS EERVKKLLELTPPKG EFLH
Sbjct: 121 PSFRRHVLVQCLILFDYLKAPGKGDKDLPSENMKEEITSWEERVKKLLELTPPKGTEFLH 180

Query: 350 KIEHILEREKNWVWWKRDGCLPYEKQPMEKKTVSDVARKRKPRWRMGNKELSQLWKWADQ 409
           KIEHILEREKNWVWWKRDGCLPYEKQ +EKK V D  +KR+PRWR+GNKELSQLWKWADQ
Sbjct: 181 KIEHILEREKNWVWWKRDGCLPYEKQRIEKKAVPDGPKKRRPRWRLGNKELSQLWKWADQ 240

Query: 410 NPNALTDPQRVQTPLIMEYWKPLAEDMDPAAGIEAEYHHKNNRVYCWKGLRLSARQDLEG 469
           NPNALTDPQRVQTP IMEYWKPLAEDMDP+AGIEA+YHHKNNRVYCWKGLRLSARQDLEG
Sbjct: 241 NPNALTDPQRVQTPSIMEYWKPLAEDMDPSAGIEADYHHKNNRVYCWKGLRLSARQDLEG 300

Query: 470 FSKFTDNGIEGVVPLELLPSDVRTKFQSKSNDXXXXXXXXXXXXXXHQVEENQVATPATE 529
           FSKFTD+GIEGVVPLELLP DVR+K+Q+K ND              HQ+EENQ+AT ATE
Sbjct: 301 FSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDRSKRSKKEETKGTAHQIEENQIATNATE 360

Query: 530 NDGEGIRTDAAATPMEFDAATVPDLQGGTPTPEELQKQNSDPDG 573
            DG+GIRTD  AT MEFDAAT P  QGGT TPEELQK +SD DG
Sbjct: 361 IDGDGIRTDTTATSMEFDAATAPGTQGGTTTPEELQKLSSDTDG 404


>Glyma04g16840.1 
          Length = 240

 Score =  275 bits (704), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 139/178 (78%), Positives = 145/178 (81%), Gaps = 4/178 (2%)

Query: 1   MEAFKRAIIQPGPPESFALQTVQEVIKPQKQTKLAQDXXXXXXXXXXXXXXXFVSAAVQS 60
           ME FKRAIIQPGPPESFAL+TVQEVIKPQKQTKLAQD               FVSAAVQ 
Sbjct: 1   MEVFKRAIIQPGPPESFALRTVQEVIKPQKQTKLAQDENQFLENILRMLLQEFVSAAVQF 60

Query: 61  GEKIMQFGQSIDTGETSQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMTNCKD 120
           GEKIMQFGQSID+ ET+QGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTM NCKD
Sbjct: 61  GEKIMQFGQSIDSSETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKD 120

Query: 121 IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPL 178
           IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSK    ++   +      FF L
Sbjct: 121 IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSK----IYISTLSALFVSFFSL 174