Miyakogusa Predicted Gene

Lj0g3v0087739.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087739.1 tr|Q0DLF3|Q0DLF3_ORYSJ Os05g0104900 protein
(Fragment) OS=Oryza sativa subsp. japonica
GN=Os05g01049,76.79,1e-18,U-box,U box domain; no description,Zinc
finger, RING/FYVE/PHD-type; PUTATIVE UNCHARACTERIZED
PROTEIN,CUFF.4688.1
         (140 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g09930.1                                                       266   7e-72
Glyma16g09930.2                                                       264   2e-71
Glyma16g09930.3                                                       263   4e-71
Glyma03g22210.2                                                       254   2e-68
Glyma03g22210.1                                                       254   2e-68
Glyma0220s00210.1                                                     244   2e-65
Glyma03g22210.4                                                        60   1e-09
Glyma03g22210.3                                                        59   1e-09
Glyma02g40050.1                                                        55   3e-08
Glyma18g06200.1                                                        55   3e-08
Glyma13g32290.1                                                        52   2e-07
Glyma18g47120.1                                                        49   1e-06
Glyma09g39220.1                                                        49   1e-06
Glyma06g19540.1                                                        49   1e-06
Glyma10g04320.1                                                        49   2e-06
Glyma11g30020.1                                                        48   2e-06
Glyma02g40990.1                                                        48   3e-06
Glyma08g06560.1                                                        48   3e-06
Glyma15g07050.1                                                        48   4e-06

>Glyma16g09930.1 
          Length = 397

 Score =  266 bits (679), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 125/140 (89%), Positives = 133/140 (95%)

Query: 1   MVEEIWQELAKAKYQEWERSSTKRSWELQSLKQACESALKEKHFLDGSDMEGFVDDATTT 60
           MVEEIWQELAKAKY EWERSS+KRSWELQSLK+ACESALKEKHFLD S MEGFVDDATT+
Sbjct: 237 MVEEIWQELAKAKYLEWERSSSKRSWELQSLKEACESALKEKHFLDYSQMEGFVDDATTS 296

Query: 61  HLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQK 120
           H +QLEALE VFN AAEADIP EVPDYLCC+ITLDIFHDPVITPSGLTYERAVIL+HLQK
Sbjct: 297 HSEQLEALERVFNTAAEADIPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQK 356

Query: 121 VGRFDPVTREPLDPSQLVPN 140
           VG+FDP+TREPLDPSQLVPN
Sbjct: 357 VGKFDPITREPLDPSQLVPN 376


>Glyma16g09930.2 
          Length = 195

 Score =  264 bits (675), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 125/140 (89%), Positives = 133/140 (95%)

Query: 1   MVEEIWQELAKAKYQEWERSSTKRSWELQSLKQACESALKEKHFLDGSDMEGFVDDATTT 60
           MVEEIWQELAKAKY EWERSS+KRSWELQSLK+ACESALKEKHFLD S MEGFVDDATT+
Sbjct: 35  MVEEIWQELAKAKYLEWERSSSKRSWELQSLKEACESALKEKHFLDYSQMEGFVDDATTS 94

Query: 61  HLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQK 120
           H +QLEALE VFN AAEADIP EVPDYLCC+ITLDIFHDPVITPSGLTYERAVIL+HLQK
Sbjct: 95  HSEQLEALERVFNTAAEADIPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQK 154

Query: 121 VGRFDPVTREPLDPSQLVPN 140
           VG+FDP+TREPLDPSQLVPN
Sbjct: 155 VGKFDPITREPLDPSQLVPN 174


>Glyma16g09930.3 
          Length = 207

 Score =  263 bits (672), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 125/140 (89%), Positives = 133/140 (95%)

Query: 1   MVEEIWQELAKAKYQEWERSSTKRSWELQSLKQACESALKEKHFLDGSDMEGFVDDATTT 60
           MVEEIWQELAKAKY EWERSS+KRSWELQSLK+ACESALKEKHFLD S MEGFVDDATT+
Sbjct: 47  MVEEIWQELAKAKYLEWERSSSKRSWELQSLKEACESALKEKHFLDYSQMEGFVDDATTS 106

Query: 61  HLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQK 120
           H +QLEALE VFN AAEADIP EVPDYLCC+ITLDIFHDPVITPSGLTYERAVIL+HLQK
Sbjct: 107 HSEQLEALERVFNTAAEADIPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQK 166

Query: 121 VGRFDPVTREPLDPSQLVPN 140
           VG+FDP+TREPLDPSQLVPN
Sbjct: 167 VGKFDPITREPLDPSQLVPN 186


>Glyma03g22210.2 
          Length = 276

 Score =  254 bits (650), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 121/140 (86%), Positives = 129/140 (92%)

Query: 1   MVEEIWQELAKAKYQEWERSSTKRSWELQSLKQACESALKEKHFLDGSDMEGFVDDATTT 60
           MVEEIWQELAKAKY EWER S+KRSWELQ LK+ACESALKEKHFLD S MEGFVDDATT+
Sbjct: 116 MVEEIWQELAKAKYLEWERLSSKRSWELQCLKEACESALKEKHFLDFSQMEGFVDDATTS 175

Query: 61  HLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQK 120
             +QLEALE VFN AAEAD P EVPDYLCC+ITLDIFHDPVITPSGLTYERAVIL+HLQK
Sbjct: 176 QSEQLEALERVFNTAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQK 235

Query: 121 VGRFDPVTREPLDPSQLVPN 140
           VG+FDP+TREPLDPSQLVPN
Sbjct: 236 VGKFDPITREPLDPSQLVPN 255


>Glyma03g22210.1 
          Length = 278

 Score =  254 bits (650), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 121/140 (86%), Positives = 129/140 (92%)

Query: 1   MVEEIWQELAKAKYQEWERSSTKRSWELQSLKQACESALKEKHFLDGSDMEGFVDDATTT 60
           MVEEIWQELAKAKY EWER S+KRSWELQ LK+ACESALKEKHFLD S MEGFVDDATT+
Sbjct: 118 MVEEIWQELAKAKYLEWERLSSKRSWELQCLKEACESALKEKHFLDFSQMEGFVDDATTS 177

Query: 61  HLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQK 120
             +QLEALE VFN AAEAD P EVPDYLCC+ITLDIFHDPVITPSGLTYERAVIL+HLQK
Sbjct: 178 QSEQLEALERVFNTAAEADTPTEVPDYLCCRITLDIFHDPVITPSGLTYERAVILEHLQK 237

Query: 121 VGRFDPVTREPLDPSQLVPN 140
           VG+FDP+TREPLDPSQLVPN
Sbjct: 238 VGKFDPITREPLDPSQLVPN 257


>Glyma0220s00210.1 
          Length = 187

 Score =  244 bits (624), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/140 (84%), Positives = 128/140 (91%)

Query: 1   MVEEIWQELAKAKYQEWERSSTKRSWELQSLKQACESALKEKHFLDGSDMEGFVDDATTT 60
           MVEEIWQELAKAK+ EWERSS+KRSWELQSLK+ACESALKEKHFLD S MEGFVDDATT+
Sbjct: 27  MVEEIWQELAKAKHLEWERSSSKRSWELQSLKEACESALKEKHFLDYSQMEGFVDDATTS 86

Query: 61  HLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQK 120
           H +QLEALE VFN  AEAD P EVPDYLCC+ITLDIF D VIT SGLTYERAVIL+HLQK
Sbjct: 87  HSEQLEALEKVFNTTAEADTPTEVPDYLCCRITLDIFLDLVITRSGLTYERAVILEHLQK 146

Query: 121 VGRFDPVTREPLDPSQLVPN 140
           VG+F+P+TREPLDPSQLVPN
Sbjct: 147 VGKFNPITREPLDPSQLVPN 166


>Glyma03g22210.4 
          Length = 160

 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 29/32 (90%)

Query: 1   MVEEIWQELAKAKYQEWERSSTKRSWELQSLK 32
           MVEEIWQELAKAKY EWER S+KRSWELQ LK
Sbjct: 118 MVEEIWQELAKAKYLEWERLSSKRSWELQCLK 149


>Glyma03g22210.3 
          Length = 154

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 28/32 (87%), Positives = 29/32 (90%)

Query: 1   MVEEIWQELAKAKYQEWERSSTKRSWELQSLK 32
           MVEEIWQELAKAKY EWER S+KRSWELQ LK
Sbjct: 116 MVEEIWQELAKAKYLEWERLSSKRSWELQCLK 147


>Glyma02g40050.1 
          Length = 692

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 2/88 (2%)

Query: 53  FVDDATTTHLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERA 112
           F+D   +   +  E L  V  K A++ IP  VP   CC ++L++  DPVI  SG TYERA
Sbjct: 167 FIDQMISVVNRMHEHL--VMLKQAQSSIPVLVPADFCCPLSLELMMDPVIVASGQTYERA 224

Query: 113 VILDHLQKVGRFDPVTREPLDPSQLVPN 140
            I + +       P TR+ L  + L+PN
Sbjct: 225 FIKNWIDLGLTVCPKTRQTLVHTNLIPN 252


>Glyma18g06200.1 
          Length = 776

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 53  FVDDATTTHLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERA 112
           F+D       +  E L  V  K A++  P  +P   CC ++L++  DPVI  SG TYERA
Sbjct: 237 FIDQMIAVVTRMHERL--VMLKQAQSSSPVSIPADFCCPLSLELMTDPVIVASGQTYERA 294

Query: 113 VILDHLQKVGRFDPVTREPLDPSQLVPN 140
            I + +       P TR+ L  + L+PN
Sbjct: 295 FIKNWIDLGLTVCPKTRQTLVHTHLIPN 322


>Glyma13g32290.1 
          Length = 373

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)

Query: 82  AEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPL-DPSQLVPN 140
           AE+P+YL C I+L+I  DPVI  SG T++R+ I   L    R  P+T+ PL + S L+PN
Sbjct: 5   AELPEYLKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLPEHSSLIPN 64


>Glyma18g47120.1 
          Length = 632

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 30/57 (52%)

Query: 84  VPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPLDPSQLVPN 140
           +P    C ITL+I  DPVI  SG TYER  I    Q      P TR+PL+   L PN
Sbjct: 259 IPHEFLCPITLEIMTDPVIVTSGQTYERESIKKWFQSNHNTCPKTRQPLEHLSLAPN 315


>Glyma09g39220.1 
          Length = 643

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 34/70 (48%)

Query: 71  VFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTRE 130
           V +K  E      +P    C ITL+I  DPVI  SG TYER  I    Q      P TR+
Sbjct: 257 VVSKMLERCTSLVIPHEFLCPITLEIMTDPVIVTSGQTYERESIEKWFQSNHNTCPKTRQ 316

Query: 131 PLDPSQLVPN 140
           PL+   L PN
Sbjct: 317 PLEHLSLAPN 326


>Glyma06g19540.1 
          Length = 683

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 56  DATTTHLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVIL 115
           D  ++ +KQ+EA      K +   +   VP+   C I+L+I  DPV   SG TY RA I 
Sbjct: 254 DYQSSGMKQIEA------KCSMEMLSCVVPEDFRCPISLEIMTDPVTISSGQTYNRASIQ 307

Query: 116 DHLQKVGRFDPVTREPLDPSQLVPN 140
                     P TRE L  ++LVPN
Sbjct: 308 KWFNSGNLICPKTREKLASTELVPN 332


>Glyma10g04320.1 
          Length = 663

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 6/60 (10%)

Query: 84  VPDYLCCKITLDIFHDPVITPSGLTYERAVI---LDHLQKVGRFDPVTREPLDPSQLVPN 140
           +P Y  C ++L++  DPVI  SG TYER  I   LDH   V    P TR+ L P+ L+PN
Sbjct: 241 IPLYFRCPLSLELMLDPVIVASGQTYERQSIQKWLDHGLTVC---PKTRQRLTPTNLIPN 297


>Glyma11g30020.1 
          Length = 814

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 4/84 (4%)

Query: 57  ATTTHLKQLEALEGVFNKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILD 116
           A  TH+ +      V  K A++  P  +P   CC ++L++  DPVI  SG TYERA I +
Sbjct: 206 AVVTHMHE----RLVMLKQAQSISPVPIPADFCCPLSLELMTDPVIVASGQTYERAFIKN 261

Query: 117 HLQKVGRFDPVTREPLDPSQLVPN 140
            +         TR+ L  + L+PN
Sbjct: 262 WIDLGLTVCAKTRQTLVHTNLIPN 285


>Glyma02g40990.1 
          Length = 438

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 36/68 (52%)

Query: 73  NKAAEADIPAEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPL 132
           N   + +I   +P +  C +TLD+  DPV   +G+TY+R  I   ++   R  PVT+  L
Sbjct: 22  NFGGDLEIDIAIPTHFRCPVTLDMMKDPVTVSTGITYDRDSIEKWIESGNRTCPVTKTEL 81

Query: 133 DPSQLVPN 140
               ++PN
Sbjct: 82  TTFDMIPN 89


>Glyma08g06560.1 
          Length = 356

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)

Query: 84  VPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPL-DPSQLVPN 140
           +PDY  C I+L+I  DPVI  SG T++R+ I   L    R  P+T+ PL D   L+PN
Sbjct: 5   LPDYFKCPISLEIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLPDHPSLIPN 62


>Glyma15g07050.1 
          Length = 368

 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 82  AEVPDYLCCKITLDIFHDPVITPSGLTYERAVILDHLQKVGRFDPVTREPLDP-SQLVPN 140
           A++PD+  C I+L I  DPVI  SG T++R+ I   L    R  P+T+ PL   S L+PN
Sbjct: 5   AQLPDHFKCPISLQIMSDPVILSSGHTFDRSSIQRWLDAGHRTCPITKLPLPAHSSLIPN 64