Miyakogusa Predicted Gene

Lj0g3v0087309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087309.1 Non Chatacterized Hit- tr|I3S3Z9|I3S3Z9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,57.14,7e-19,FAMILY NOT NAMED,NULL; FBD,FBD; domain in FBox and
BRCT domain containing pl,FBD,CUFF.4652.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g46320.1                                                       104   2e-23
Glyma18g35330.1                                                        78   2e-15
Glyma08g46590.2                                                        76   8e-15
Glyma17g05620.1                                                        73   6e-14
Glyma18g35360.1                                                        73   8e-14
Glyma18g35320.1                                                        66   9e-12
Glyma18g35370.1                                                        64   3e-11

>Glyma08g46320.1 
          Length = 379

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 54/118 (45%), Positives = 80/118 (67%), Gaps = 9/118 (7%)

Query: 1   MKWHSVLTMLKQCPKLQNFGLNMELMS-ANLVWISPKFVPECLSSQLRKCSITNYDSTRF 59
           ++W+ V  M+K CPKLQ F L + L S   +VW  P+ VPEC+SS+LR+C+I NY   ++
Sbjct: 261 VRWNLVFEMIKHCPKLQTFVLFLPLESFPPMVWTFPQIVPECISSKLRRCTIMNYKGKKY 320

Query: 60  QLHFAKYIMQNSRVLQTMTIYTAPS-----SSLQKKFEMLKELSIYPR---TCELLFK 109
           +L FAKYI+QNSR LQ+MTI+         ++ Q K  +L+EL++ P+   TC++LFK
Sbjct: 321 ELQFAKYILQNSRALQSMTIHNKRVRNTYFANPQDKIRILQELAMCPKSSTTCKILFK 378


>Glyma18g35330.1 
          Length = 342

 Score = 78.2 bits (191), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 68/101 (67%), Gaps = 6/101 (5%)

Query: 6   VLTMLKQCPKLQNFGLNMELM----SANLVWISPKFVPECLSSQLRKCSITNYDSTRFQL 61
           ++ +L +CP LQ   ++   +    S+++ +  P+FVP+CLS+QL++C +  Y     +L
Sbjct: 240 LINLLHECPNLQILVVDEGNLFVKTSSDVSY--PQFVPKCLSTQLKRCCVKKYGGQESEL 297

Query: 62  HFAKYIMQNSRVLQTMTIYTAPSSSLQKKFEMLKELSIYPR 102
            FA+Y++QN+RVL +MTIY+  SS+  ++ +M+K+LS  PR
Sbjct: 298 RFARYVLQNARVLYSMTIYSISSSNSGERLQMIKKLSSCPR 338


>Glyma08g46590.2 
          Length = 380

 Score = 75.9 bits (185), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 11/117 (9%)

Query: 2   KWHSVLTMLKQCPKLQNFGLNMELMS------ANLVWISPKFVPECLSSQLRKCSITNYD 55
            W  VL ++++CP LQ   ++M  +           W  P+ VP  +S  L+ C I  Y 
Sbjct: 263 DWVDVLEVIQRCPNLQILDIDMGSIDMTTRDDEGADWPFPRSVPSSISLHLKTCFIRCYG 322

Query: 56  STRFQLHFAKYIMQNSRVLQTMTIYTAPSSSLQKKFEMLKELSIYP---RTCELLFK 109
            ++ +L FA+YIM+N+R L+TM I T   +S Q+KF MLK+LS+ P   R C+L FK
Sbjct: 323 GSKGELRFARYIMRNARHLRTMKISTY--ASRQQKFNMLKKLSLCPRRSRICKLSFK 377


>Glyma17g05620.1 
          Length = 158

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 3/81 (3%)

Query: 32  WISPKFVPECLSSQLRKCSITNYDSTRFQLHFAKYIMQNSRVLQTMTIYTAPSSSLQKKF 91
           W  P+ +P C+S  L+ C +TNY  ++ +  FA+YIMQN+  LQTMTI T  SS+  +K 
Sbjct: 78  WSYPQSIPTCVSLHLKTCRLTNYVGSKGEFQFARYIMQNASHLQTMTICTNTSSNEGEKL 137

Query: 92  EMLKELSIYPR---TCELLFK 109
           EM++ LS   R   TC+LLFK
Sbjct: 138 EMIENLSSCTRCSATCKLLFK 158


>Glyma18g35360.1 
          Length = 357

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 56/104 (53%), Gaps = 4/104 (3%)

Query: 3   WHSVLTMLKQCPKLQ----NFGLNMELMSANLVWISPKFVPECLSSQLRKCSITNYDSTR 58
           W  +L +L  CP LQ    + G +    S +  W+    VP+CLSS+L+ C    Y+   
Sbjct: 215 WDWLLKLLHCCPNLQILVIDKGNSFNKTSNDENWVYSHLVPKCLSSKLKTCRFQKYEGWE 274

Query: 59  FQLHFAKYIMQNSRVLQTMTIYTAPSSSLQKKFEMLKELSIYPR 102
            +  FA+YIMQN+R L   TI +   S L  KF+M+K LS  PR
Sbjct: 275 CEFQFARYIMQNARALCAFTICSTGFSPLAAKFQMIKRLSSCPR 318


>Glyma18g35320.1 
          Length = 345

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 6   VLTMLKQCPKLQNFGLNMELMSANLVWISPKFVPECLSSQLRKCSITNYDSTRFQLHFAK 65
           VL ++K+CPKLQ   +     +       P+ VP C+S  L+ C++  Y+ ++ +  F  
Sbjct: 239 VLDLIKRCPKLQILTIYKVDSALFAEGDYPQSVPICISFHLKICTLKRYNGSKDEFRFVT 298

Query: 66  YIMQNSRVLQTMTIYTAPSSSLQKKFEMLKELSIYPR---TCELLFK 109
           YIM+NS+ LQ MTI      + ++K EM ++LS+  R   +C+LLF+
Sbjct: 299 YIMENSKYLQIMTISCNSDINKERKLEMFQKLSLCTRCSTSCKLLFE 345


>Glyma18g35370.1 
          Length = 409

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 4/80 (5%)

Query: 32  WISPKFVPECLSSQLRKCSITNYDSTRFQLHFAKYIMQNSRVLQTMTIYTAPSSSLQKKF 91
           WI P  VPECL   L+   +  Y     +L F  YIMQN+RVL+TMTIY + S   ++K 
Sbjct: 330 WIHPLLVPECLL-HLKTFCLREYQGLETELDFVGYIMQNARVLETMTIYISSSLGSEEKL 388

Query: 92  EMLKELSIYPR---TCELLF 108
           ++ + LSI  R   TC+++F
Sbjct: 389 QIRRHLSILQRNFETCQIVF 408