Miyakogusa Predicted Gene

Lj0g3v0087059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087059.1 Non Chatacterized Hit- tr|I3SIQ2|I3SIQ2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.61,0,ARP2/3
COMPLEX 34 KDA SUBUNIT,Arp2/3 complex, 34kDa subunit p34-Arc;
P34-Arc,Arp2/3 complex, 34kDa s,CUFF.4635.1
         (256 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g32790.1                                                       466   e-132
Glyma16g14750.1                                                       255   3e-68
Glyma20g21550.1                                                       122   5e-28
Glyma10g27630.1                                                       112   4e-25

>Glyma08g32790.1 
          Length = 324

 Score =  466 bits (1200), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 223/256 (87%), Positives = 237/256 (92%)

Query: 1   MILLQSHSRFLLQTLLNRAQNIEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 60
           MILLQSHSRFLLQTLLNRAQN+EKGVELDHHWVEFDDVRYHIQVSMKNPH+         
Sbjct: 1   MILLQSHSRFLLQTLLNRAQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPT 60

Query: 61  XXXETIFVCGLPFGAIEAIKATYGGIVQILDPPKDGFNLTLKINLSKIPANQEQRHAFLV 120
              ETIFVCGLPFGAIEAIKA YG +VQILDPP+DGFNLTLKINLSK+PANQEQ+HAFLV
Sbjct: 61  PSSETIFVCGLPFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAFLV 120

Query: 121 KVASVREVVLGAPLRVILKHLASRTVAPDMDPVVALVHRPKESFFLLPQADKVTVVYPMR 180
           KVAS+REVVLGAPLRVIL+HLA+RTVA DMDP+VALVHRP ESFFL PQADKVTVVYPMR
Sbjct: 121 KVASIREVVLGAPLRVILEHLAARTVALDMDPLVALVHRPNESFFLFPQADKVTVVYPMR 180

Query: 181 FNDSIDMVLATSFLQEFVEARRTAGLSNTPPCSWSHTPPLELKELPADALSANAGFVSFV 240
           FNDSID+VLATSFLQEFVEARRTAGL+NTPPCSWS TPPLELKE+PADALSANAGFV+FV
Sbjct: 181 FNDSIDIVLATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKEVPADALSANAGFVTFV 240

Query: 241 IFPRHVEGPKLDRTVW 256
           IFPRHVEG KLDRTVW
Sbjct: 241 IFPRHVEGQKLDRTVW 256


>Glyma16g14750.1 
          Length = 248

 Score =  255 bits (652), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 144/252 (57%), Positives = 164/252 (65%), Gaps = 34/252 (13%)

Query: 23  EKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXXXXXETIFVCGLPFGAIEAIKAT 82
           EKGVELDHHWVEFDDVRYHIQVSMKNPH+            ETIFV            + 
Sbjct: 1   EKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPTPSSETIFV------------SA 48

Query: 83  YGGIVQILDPPKDGFNLTLKINLSKIPANQ--EQRHAFLVKVASVREVVLGAPLR----- 135
           YG +VQILDPP+DGFNLTLKINLSK+PANQ       F   +     + +   L+     
Sbjct: 49  YGNLVQILDPPRDGFNLTLKINLSKLPANQVVSWPSVFANIICPTNNITIIIYLQHSHSS 108

Query: 136 -VILKHLASRTVAPDMDPVVA------LVHRPKESFF----LLPQADKVTVVYPMRFNDS 184
            V    L ++     ++PV +       +   K  F      +  ADKVTVVYPMRFNDS
Sbjct: 109 CVYRTKLDTQEYQTHINPVSSRMSIADFIWEIKIPFVDCATSILNADKVTVVYPMRFNDS 168

Query: 185 IDMVLATSFLQEFVEARRTAGLSNTPPCSWSHTPPLELKELPADALSANAGFVSFVIFPR 244
           ID+VLATSFLQEFVEARRTAGL+NTPPCSWS TPPLELKE+PA    ANAGFV+FVIFPR
Sbjct: 169 IDIVLATSFLQEFVEARRTAGLNNTPPCSWSLTPPLELKEVPA----ANAGFVTFVIFPR 224

Query: 245 HVEGPKLDRTVW 256
           HVEG KLDRTVW
Sbjct: 225 HVEGQKLDRTVW 236


>Glyma20g21550.1 
          Length = 223

 Score =  122 bits (305), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 113/217 (52%), Gaps = 15/217 (6%)

Query: 23  EKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXXXXXETIFVCGLPFGAIEAIKAT 82
           EK +E+DH   EF  V YHIQ    NP +              +    L +  IE +K  
Sbjct: 4   EKPLEIDHPLYEFGSVEYHIQSQASNPQVAYLSISMSPLC-HGVLPNELSYYTIEMVKGL 62

Query: 83  YGGIVQILDPPKDGFNLTLKINLSKIPANQEQRHAFLVKVASVREVVLGAPLRVILKHLA 142
              +V+I +P K+G+ L LK+NL++IP N++     +++++++  V+L + L+ IL ++ 
Sbjct: 63  CPNVVEIAEPAKEGYQLALKLNLNQIPRNKDYDKV-IMEISTIHSVILSSQLKEILWNVN 121

Query: 143 SRTVAPDMDPVVALVHRPKESFFLLPQADKVTVVYPMRFNDSIDMVLATSFLQEFVEARR 202
           S      M   + L++ PK+ F L+ Q  ++  V+P+RF +  D+++AT+F Q       
Sbjct: 122 SDDALQGMYKPIKLLYHPKDLFVLIRQPQRIIAVFPIRFKEKSDVIIATNFFQ------- 174

Query: 203 TAGLSNTPPCSWSHTPPLELKELPADALSANAGFVSF 239
                  PPC+WS  PP EL+    + LS N GF  F
Sbjct: 175 ------VPPCNWSAIPPPELRGEAFEDLSTNGGFFIF 205


>Glyma10g27630.1 
          Length = 257

 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 52/136 (38%), Positives = 83/136 (61%)

Query: 121 KVASVREVVLGAPLRVILKHLASRTVAPDMDPVVALVHRPKESFFLLPQADKVTVVYPMR 180
           ++++V  V+L + L+ IL ++        M   + LV+ PK+ FFL+ Q  ++  V+P+R
Sbjct: 7   EISTVHSVILSSQLKEILWNVNFDDALQGMYKPIKLVYHPKDHFFLIRQPQRIIAVFPIR 66

Query: 181 FNDSIDMVLATSFLQEFVEARRTAGLSNTPPCSWSHTPPLELKELPADALSANAGFVSFV 240
           F +  D+++AT+F QE V+   +   +  PPC+WS  PP EL+    + LS N GF +F 
Sbjct: 67  FREKSDVIIATAFFQELVDVGSSDKWAKVPPCNWSAIPPPELRGEAFEDLSTNGGFFTFD 126

Query: 241 IFPRHVEGPKLDRTVW 256
           I  RHVEG +LD+TVW
Sbjct: 127 ISSRHVEGNRLDKTVW 142