Miyakogusa Predicted Gene

Lj0g3v0085329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085329.1 tr|D7KZK3|D7KZK3_ARALL NC domain-containing
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAF,69.84,2e-19,seg,NULL; LRAT,LRAT-like domain; no
description,NULL; NC DOMAIN-CONTAINING PROTEIN,NULL; HRAS-LIKE
S,CUFF.4508.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g35490.1                                                       127   2e-30
Glyma10g10010.1                                                       127   2e-30
Glyma14g38930.1                                                       103   4e-23
Glyma18g05370.1                                                       101   2e-22
Glyma11g31900.1                                                        96   1e-20
Glyma11g31910.1                                                        81   3e-16
Glyma03g41990.1                                                        70   6e-13
Glyma19g44680.1                                                        70   6e-13
Glyma18g05350.1                                                        62   2e-10

>Glyma02g35490.1 
          Length = 259

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/62 (93%), Positives = 60/62 (96%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYIGDDKVIHFTRRGQEVGTGTVLDLLL 60
          MGLLSNR+TRESLKPGDHIYSWRTAYIYAHHGIY+ DDKVIHFTRRGQEVGTGT LDLLL
Sbjct: 1  MGLLSNRVTRESLKPGDHIYSWRTAYIYAHHGIYVSDDKVIHFTRRGQEVGTGTALDLLL 60

Query: 61 IS 62
          IS
Sbjct: 61 IS 62


>Glyma10g10010.1 
          Length = 259

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 58/62 (93%), Positives = 60/62 (96%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYIGDDKVIHFTRRGQEVGTGTVLDLLL 60
          MGLLSNR+TRESLKPGDHIYSWRTAYIYAHHGIY+GDDKVIHFTR GQEVGTGT LDLLL
Sbjct: 1  MGLLSNRVTRESLKPGDHIYSWRTAYIYAHHGIYVGDDKVIHFTRHGQEVGTGTALDLLL 60

Query: 61 IS 62
          IS
Sbjct: 61 IS 62


>Glyma14g38930.1 
          Length = 254

 Score =  103 bits (257), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 52/62 (83%), Gaps = 1/62 (1%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYIGDDKVIHFTR-RGQEVGTGTVLDLL 59
          MG+LSN I RE LKPGDHIYSWR AYIYAHHGIY+GD  VIHFTR  GQE+GTGTVLD L
Sbjct: 1  MGVLSNMIDREQLKPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDNL 60

Query: 60 LI 61
          L 
Sbjct: 61 LF 62


>Glyma18g05370.1 
          Length = 230

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/63 (76%), Positives = 54/63 (85%), Gaps = 1/63 (1%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYIGDDKVIHFTRR-GQEVGTGTVLDLL 59
          MG+LSN+I RE LKPGDHIYSWR AYIYAHHGIY+G+  VIHFTRR GQE  +GT+LD L
Sbjct: 1  MGVLSNKIDREQLKPGDHIYSWRQAYIYAHHGIYVGEGMVIHFTRRAGQETRSGTILDRL 60

Query: 60 LIS 62
          LIS
Sbjct: 61 LIS 63


>Glyma11g31900.1 
          Length = 173

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 1/63 (1%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYIGDDKVIHFTR-RGQEVGTGTVLDLL 59
          MG+LSN+I  E LKPGDHIYSWR AYI+AHHG Y+G+  VIHF+R  G+E GTGT+LD L
Sbjct: 1  MGVLSNKIEMEQLKPGDHIYSWRQAYIFAHHGTYVGEGMVIHFSRGEGKESGTGTILDRL 60

Query: 60 LIS 62
          LIS
Sbjct: 61 LIS 63


>Glyma11g31910.1 
          Length = 245

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/66 (62%), Positives = 47/66 (71%), Gaps = 2/66 (3%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYIGDDKVIHFTR-RGQEVGTGTVL-DL 58
          MG+ SN+I R+ LKPGDHIYSWR AYI AHHGIY+G   VIHFTR   QE  T T+L   
Sbjct: 1  MGVFSNKIDRKQLKPGDHIYSWRQAYIIAHHGIYVGKGMVIHFTRGSSQETETRTMLGGF 60

Query: 59 LLISPN 64
           L SP+
Sbjct: 61 YLSSPH 66


>Glyma03g41990.1 
          Length = 258

 Score = 70.1 bits (170), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 35/43 (81%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYIGDDKVIHF 43
          MGLLSNR+ R  +KPGDHIY++R  + Y+HHGI++G  KV+HF
Sbjct: 1  MGLLSNRVERHEIKPGDHIYTYRAVFTYSHHGIFVGGSKVVHF 43


>Glyma19g44680.1 
          Length = 259

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 26/43 (60%), Positives = 35/43 (81%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYIGDDKVIHF 43
          MGLLSNR+ R  +KPGDHIY++R  + Y+HHGI++G  KV+HF
Sbjct: 1  MGLLSNRVERHEIKPGDHIYTYRAVFTYSHHGIFVGGSKVVHF 43


>Glyma18g05350.1 
          Length = 207

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 29/35 (82%)

Query: 1  MGLLSNRITRESLKPGDHIYSWRTAYIYAHHGIYI 35
          MG+ SN+I RE LKPGD IYSWR AYI AHHG+YI
Sbjct: 1  MGVFSNKIDREQLKPGDVIYSWRQAYIIAHHGLYI 35