Miyakogusa Predicted Gene

Lj0g3v0085239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085239.1 Non Chatacterized Hit- tr|I1JQ40|I1JQ40_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,78.85,4e-17,seg,NULL,CUFF.4488.1
         (64 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g35520.1                                                        87   3e-18
Glyma19g38160.1                                                        69   1e-12
Glyma02g36280.1                                                        57   5e-09
Glyma07g01090.1                                                        51   3e-07
Glyma15g02850.1                                                        50   7e-07
Glyma13g42530.1                                                        48   2e-06

>Glyma03g35520.1 
          Length = 549

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 37/43 (86%), Positives = 40/43 (93%)

Query: 21 LINNGVEAFHKIYPHLQSVSAVSVSGMHRTGYHFQPPRNWING 63
          LINNGVEAFHK+YPHLQSVS +SVSG HRT YHFQPP+NWING
Sbjct: 12 LINNGVEAFHKVYPHLQSVSTISVSGQHRTAYHFQPPKNWING 54


>Glyma19g38160.1 
          Length = 540

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 28/35 (80%), Positives = 31/35 (88%)

Query: 29 FHKIYPHLQSVSAVSVSGMHRTGYHFQPPRNWING 63
          FHK+YPHLQSVS +SVS  HRT YHFQPP+NWING
Sbjct: 1  FHKVYPHLQSVSTISVSRQHRTAYHFQPPKNWING 35


>Glyma02g36280.1 
          Length = 212

 Score = 57.0 bits (136), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 28/34 (82%)

Query: 29 FHKIYPHLQSVSAVSVSGMHRTGYHFQPPRNWIN 62
          FH IY  LQS+SA SVS +HRTGYHFQP +NWIN
Sbjct: 1  FHYIYADLQSISAPSVSKLHRTGYHFQPRKNWIN 34


>Glyma07g01090.1 
          Length = 561

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query: 25 GVEAFHKIYPHLQSVSAVSVSGMHRTGYHFQPPRNWING 63
          G  A H +Y +LQS+S+ S +  +RT YHFQPP+NWING
Sbjct: 17 GSAATHHVYRNLQSLSSDSSNQPYRTAYHFQPPKNWING 55


>Glyma15g02850.1 
          Length = 575

 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 28/37 (75%)

Query: 26 VEAFHKIYPHLQSVSAVSVSGMHRTGYHFQPPRNWIN 62
          +EA H +Y +LQ++S+ S    +RT YHFQPP+NWIN
Sbjct: 24 IEATHHVYRNLQTLSSDSSDQPYRTAYHFQPPKNWIN 60


>Glyma13g42530.1 
          Length = 571

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/38 (52%), Positives = 28/38 (73%)

Query: 26 VEAFHKIYPHLQSVSAVSVSGMHRTGYHFQPPRNWING 63
          +EA H +Y +LQ++S+ S    +RT YHFQP +NWING
Sbjct: 23 IEATHHVYRNLQTLSSDSSDQPYRTAYHFQPRKNWING 60