Miyakogusa Predicted Gene

Lj0g3v0084829.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0084829.1 tr|G7KT22|G7KT22_MEDTR 3-methyl-2-oxobutanoate
hydroxymethyltransferase OS=Medicago truncatula
GN=MT,83.48,0,PanB,Ketopantoate hydroxymethyltransferase; seg,NULL;
Pantoate_transf,Ketopantoate hydroxymethyltran,CUFF.4475.1
         (357 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g06950.1                                                       538   e-153
Glyma09g39030.1                                                       429   e-120
Glyma07g06950.2                                                       357   1e-98
Glyma18g47310.1                                                       343   1e-94

>Glyma07g06950.1 
          Length = 351

 Score =  538 bits (1385), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/334 (80%), Positives = 283/334 (84%), Gaps = 15/334 (4%)

Query: 39  NVPENTVYSGPISQNSNQRVTLAQLRQKHNQC-PV--------------DRAGIDICLVG 83
           NVPENTVYSGP SQ+S +RVTL+QLRQKH    P+              D AG+DICLVG
Sbjct: 18  NVPENTVYSGPTSQSSTKRVTLSQLRQKHRASQPITMVTAYDYPAAVHLDTAGVDICLVG 77

Query: 84  DSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPLLVGDLPFGTYECSPNQAVDAAVRI 143
           DSAAMVVHG+DTTLPIT++EMLVHCRAVARGAKTPLLVGDL FGTYE S NQAVD AVR+
Sbjct: 78  DSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKTPLLVGDLAFGTYESSSNQAVDTAVRM 137

Query: 144 LKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAV 203
           LKEG MDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQG+NVASAV
Sbjct: 138 LKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVASAV 197

Query: 204 KVVETALALQEAGCFSVVLECXXXXXXXXXXXXLQIPTIGIGAGPFCSGQVLVYHDLLGM 263
           KVVETALALQEAGCFSVVLEC            LQIPTIGIGAGPFCSGQVLVYHDLLGM
Sbjct: 198 KVVETALALQEAGCFSVVLECVPAPVAAATTATLQIPTIGIGAGPFCSGQVLVYHDLLGM 257

Query: 264 LQHPHHAKVTPKFCKQYARVGDVITKALVEYKEDVINGSFPDAQHSPYKISETDANGFLN 323
           LQHPHHAKVTPKFCKQYARVGDVI KAL+EYKEDVINGSFPDA HSPYKIS+TDA+ F  
Sbjct: 258 LQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVINGSFPDAHHSPYKISKTDADVFST 317

Query: 324 ELQRLGFDKAASAASDAVQKMVTAKSIGERTSTK 357
           ELQRLG DKAASAAS+AVQKM T KS  E   TK
Sbjct: 318 ELQRLGLDKAASAASEAVQKMDTTKSTSEGKQTK 351


>Glyma09g39030.1 
          Length = 305

 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/309 (71%), Positives = 245/309 (79%), Gaps = 25/309 (8%)

Query: 56  QRVTLAQLRQKH-NQCP--------------VDRAGIDICLVGDSAAMVVHGYDTTLPIT 100
           ++VTL +L+QKH  Q P              VD AGID+C VGDS +MV+HG+DTT+PIT
Sbjct: 7   EKVTLTRLKQKHRKQEPITVVSTHDYPSAVHVDVAGIDVCHVGDSVSMVIHGHDTTIPIT 66

Query: 101 IDEMLVHCRAVARGAKTPLLVGDLPFGTYECSPNQAVDAAVRILKEGRMDAIKLEGGSPS 160
           +++ML         AK PLLVGDLPFGTYE S NQAVD AVR+LKEG MDAIKLEGGS S
Sbjct: 67  LEQML---------AKRPLLVGDLPFGTYESSSNQAVDTAVRMLKEGNMDAIKLEGGSTS 117

Query: 161 RIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGCFSV 220
           R+VAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGR VASA+KVVE ALA QEAGCFSV
Sbjct: 118 RVVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRTVASAIKVVEMALAFQEAGCFSV 177

Query: 221 VLECXXXXXXXXXXXXLQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQY 280
           V+EC            LQIPTIGIGAGPFCSGQVLV+HDLLGMLQHP HAKV+PKFCKQY
Sbjct: 178 VIECVPAPVAAAVTAALQIPTIGIGAGPFCSGQVLVFHDLLGMLQHP-HAKVSPKFCKQY 236

Query: 281 ARVGDVITKALVEYKEDVINGSFPDAQHSPYKISETDANGFLNELQRLGFDKAASAASDA 340
           A VG VI +AL+EYKEDVINGSFP + H PYKI E +ANGF+NELQRLG DKAASAA +A
Sbjct: 237 ACVGKVIKQALLEYKEDVINGSFPGSLHIPYKICEAEANGFINELQRLGLDKAASAAVEA 296

Query: 341 VQKMVTAKS 349
           VQ M T+KS
Sbjct: 297 VQNMDTSKS 305


>Glyma07g06950.2 
          Length = 266

 Score =  357 bits (916), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 183/231 (79%), Positives = 193/231 (83%), Gaps = 15/231 (6%)

Query: 39  NVPENTVYSGPISQNSNQRVTLAQLRQKHNQC-PV--------------DRAGIDICLVG 83
           NVPENTVYSGP SQ+S +RVTL+QLRQKH    P+              D AG+DICLVG
Sbjct: 18  NVPENTVYSGPTSQSSTKRVTLSQLRQKHRASQPITMVTAYDYPAAVHLDTAGVDICLVG 77

Query: 84  DSAAMVVHGYDTTLPITIDEMLVHCRAVARGAKTPLLVGDLPFGTYECSPNQAVDAAVRI 143
           DSAAMVVHG+DTTLPIT++EMLVHCRAVARGAKTPLLVGDL FGTYE S NQAVD AVR+
Sbjct: 78  DSAAMVVHGHDTTLPITLEEMLVHCRAVARGAKTPLLVGDLAFGTYESSSNQAVDTAVRM 137

Query: 144 LKEGRMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAV 203
           LKEG MDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQG+NVASAV
Sbjct: 138 LKEGGMDAIKLEGGSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVASAV 197

Query: 204 KVVETALALQEAGCFSVVLECXXXXXXXXXXXXLQIPTIGIGAGPFCSGQV 254
           KVVETALALQEAGCFSVVLEC            LQIPTIGIGAGPFCSGQV
Sbjct: 198 KVVETALALQEAGCFSVVLECVPAPVAAATTATLQIPTIGIGAGPFCSGQV 248


>Glyma18g47310.1 
          Length = 313

 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 184/272 (67%), Positives = 200/272 (73%), Gaps = 36/272 (13%)

Query: 98  PITIDEMLVHCRAVARGAKTPLLVGDLPFGTYECSPNQAVDAAVRILKEGRMDAIKLEGG 157
           PIT+++ML HCRAVARGAK PLLVGDLPFGTYE + ++AVD  VR+LKEG MDAIKLEGG
Sbjct: 63  PITLEQMLAHCRAVARGAKRPLLVGDLPFGTYESNSSKAVDTVVRMLKEGNMDAIKLEGG 122

Query: 158 SPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGRNVASAVKVVETALALQEAGC 217
           S SR+VAAKAIVEAGIAVMG VGLTPQAISVLG FRPQGR VASA+KVVE ALALQEAGC
Sbjct: 123 SISRVVAAKAIVEAGIAVMGRVGLTPQAISVLGAFRPQGRTVASAIKVVEMALALQEAGC 182

Query: 218 FSVVLECXXXXXXXXXXXXLQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPH--------- 268
           FSVV+EC            LQIPTIGIGA PFCSGQVL++HDLLGMLQHPH         
Sbjct: 183 FSVVVECVPAPVAAAATAALQIPTIGIGADPFCSGQVLLFHDLLGMLQHPHAKDSLVKLR 242

Query: 269 -HAKVTPKFCKQYARVGDVITKALVEYKEDVINGSFPDAQHSPYKISETDANGFLNELQR 327
            H   TPKFCKQYA VG+VI KAL+EYKEDVINGSF                       R
Sbjct: 243 LHLLHTPKFCKQYACVGNVINKALLEYKEDVINGSF-----------------------R 279

Query: 328 LGFDKAASAASDAVQKMVTAKSIGE---RTST 356
           LG DKAASAA +AVQ M T+KS GE   RT T
Sbjct: 280 LGLDKAASAAFEAVQTMDTSKSNGEGQQRTKT 311