Miyakogusa Predicted Gene
- Lj0g3v0084329.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0084329.1 tr|G7I946|G7I946_MEDTR ATP-dependent DNA helicase
recG OS=Medicago truncatula GN=MTR_1g031120 PE=4 S,80.09,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; no
description,NULL; Helicase_C,Helicase,,CUFF.4421.1
(410 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g21670.1 379 e-105
Glyma07g21660.1 237 1e-62
Glyma09g20380.1 204 1e-52
Glyma09g20360.1 181 9e-46
Glyma16g05050.2 150 2e-36
Glyma16g05050.1 150 2e-36
Glyma19g28140.1 149 7e-36
Glyma08g20070.1 56 6e-08
Glyma02g45030.1 53 7e-07
Glyma14g03760.1 53 7e-07
Glyma07g39910.1 51 2e-06
Glyma08g41510.1 50 4e-06
>Glyma07g21670.1
Length = 278
Score = 379 bits (973), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/221 (82%), Positives = 197/221 (89%)
Query: 162 ITDLPPGRIPVQTYTIEGNDKGFEDVYKMMMNELEDGGKVYLVYPIIELSEQLPQLRAAS 221
ITDLPPGRIPVQT+ IEGNDKG EDVYKMM+ ELEDGGKVYLVYPIIELSEQLPQLRAAS
Sbjct: 1 ITDLPPGRIPVQTFIIEGNDKGLEDVYKMMLGELEDGGKVYLVYPIIELSEQLPQLRAAS 60
Query: 222 ADFEAMSNRFHGYNCGLLHGKMKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMM 281
AD E +S++F GYNCGLLHGKM S+EKEETL+KFRTGE+HILLATQVIEIGVDVPDASMM
Sbjct: 61 ADLEVISHQFRGYNCGLLHGKMTSEEKEETLRKFRTGEIHILLATQVIEIGVDVPDASMM 120
Query: 282 VVLNSERFGIAQLHQLRGRVGRGTRQSKCILVASTASSLNRLKVLEQSSDGFHLANMXXX 341
VVLNSERFGIAQLHQLRGRVGRGTR SKC+LVAS ASSLNRLKVLEQSSDGF+LANM
Sbjct: 121 VVLNSERFGIAQLHQLRGRVGRGTRASKCVLVASAASSLNRLKVLEQSSDGFYLANMDLL 180
Query: 342 XXXXXXXXXKKQSGHLPEFPITRLEVDGNILQEAHVAALKI 382
KKQSGHLPEFP+ RLEVDGNILQ+A +AAL +
Sbjct: 181 LRGPGDLLGKKQSGHLPEFPVARLEVDGNILQDARIAALNV 221
>Glyma07g21660.1
Length = 322
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/164 (75%), Positives = 132/164 (80%), Gaps = 3/164 (1%)
Query: 1 MEVLGSGYQAAFMVPTELLAIQXXXXXXXXXXXXDEVEFKPTVALLTGSTPLKQSRIIRK 60
+EV+GSGYQAAFMVPTELLAIQ DEV FKPTVALLTGSTPLKQSR+IRK
Sbjct: 159 IEVIGSGYQAAFMVPTELLAIQHYEHLLKLLENLDEVVFKPTVALLTGSTPLKQSRMIRK 218
Query: 61 GIQTGEISMVIGTHSLIAESVEFLALRIAVVDEQHRFGVIQRGRFNSKLFC---TSSISS 117
GIQTGEISMVIGTHSLIA+SVEF ALRI VVDEQHRFGVIQRGRFNSKL T+ I
Sbjct: 219 GIQTGEISMVIGTHSLIADSVEFAALRITVVDEQHRFGVIQRGRFNSKLKNRKGTTIILF 278
Query: 118 VEDAVTDRPSRNDAYMAPHVLAMSATPIPRTLALALYGDMSLTQ 161
+ S NDAYMAPHVLAMSATPIPRTLALALYGDM++TQ
Sbjct: 279 YSNTTYIFYSGNDAYMAPHVLAMSATPIPRTLALALYGDMTMTQ 322
>Glyma09g20380.1
Length = 124
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/115 (86%), Positives = 106/115 (92%)
Query: 224 FEAMSNRFHGYNCGLLHGKMKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMMVV 283
E +S+RF GYNCGLLHGKMKS+EKEETL+KFRTGE+HILLATQVIEIGVDVPDASMMVV
Sbjct: 2 LEVISHRFQGYNCGLLHGKMKSEEKEETLRKFRTGEIHILLATQVIEIGVDVPDASMMVV 61
Query: 284 LNSERFGIAQLHQLRGRVGRGTRQSKCILVASTASSLNRLKVLEQSSDGFHLANM 338
LNS+ FGIAQL QLRGRVG GTR SKCI VAS ASSLNRLKVLEQSSDGF+LANM
Sbjct: 62 LNSKMFGIAQLDQLRGRVGHGTRPSKCISVASAASSLNRLKVLEQSSDGFYLANM 116
>Glyma09g20360.1
Length = 108
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/125 (74%), Positives = 101/125 (80%), Gaps = 17/125 (13%)
Query: 37 VEFKPTVALLTGSTPLKQSRIIRKGIQTGEISMVIGTHSLIAESVEFLALRIAVVDEQHR 96
V KPTVALLTGSTP KQSR+IRKGIQTGE+SMVIGTHSLIA+SVEF ALRIAVVDEQHR
Sbjct: 1 VPCKPTVALLTGSTPPKQSRMIRKGIQTGEVSMVIGTHSLIADSVEFSALRIAVVDEQHR 60
Query: 97 FGVIQRGRFNSKLFCTSSISSVEDAVTDRPSRNDAYMAPHVLAMSATPIPRTLALALYGD 156
FGVIQRGR N + S++DAYMAPHVLAMSATPIPRTLALALYGD
Sbjct: 61 FGVIQRGRLN-----------------NDSSKSDAYMAPHVLAMSATPIPRTLALALYGD 103
Query: 157 MSLTQ 161
M++TQ
Sbjct: 104 MTMTQ 108
>Glyma16g05050.2
Length = 826
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 173/342 (50%), Gaps = 47/342 (13%)
Query: 3 VLGSGYQAAFMVPTELLAIQXXXXXXXXXXXXDEVEFKPTVALLTGSTPLKQSRIIRKGI 62
V+ + QA + PT +LA Q +++ V LL+ + I
Sbjct: 318 VVSAKKQAMVLAPTIVLAKQHFDVISERFSVYPDIK----VGLLSRFQTKAEKEENLDKI 373
Query: 63 QTGEISMVIGTHSLIAESVEFLALRIAVVDEQHRFGVIQRGRFNSKLFCTSSISSVEDAV 122
+ G + +++GTHSL+ + V + L + VVDE+ RFGV Q+ + S F TS
Sbjct: 374 KNGSLDIIVGTHSLLGDRVTYNNLGLLVVDEEQRFGVKQKEKIAS--FKTSV-------- 423
Query: 123 TDRPSRNDAYMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVQTYTIEGNDK 182
VL +SATPIPRTL LAL G + ++ PP R+P++T+ ++
Sbjct: 424 -------------DVLTLSATPIPRTLYLALTGFRDASLMSTPPPERVPIKTHLSSFSE- 469
Query: 183 GFEDVYKMMMNELEDGGKVYLVYPIIELSEQLPQLRAASADFEAMSNRFHGYNCGLLHGK 242
+ V + EL+ GG+V+ V LP+++ ++ F + HGK
Sbjct: 470 --DKVVSAIKYELDRGGQVFYV---------LPRIKGLDEVMTFLAESFPNVEIAIAHGK 518
Query: 243 MKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMMVVLNSERFGIAQLHQLRGRVG 302
+ S + E+T++KF GE+ IL+ T ++E G+D+ +A+ +++ + ++FG+AQL+QLRGRVG
Sbjct: 519 LYSKQLEDTMEKFALGEIKILICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVG 578
Query: 303 RGTRQSKCILVASTAS-----SLNRLKVLEQSSD---GFHLA 336
R +++ L S +L RL +E+ + GF LA
Sbjct: 579 RADKEAHAYLFYPDKSLLSDQALERLAAIEECRELGQGFQLA 620
>Glyma16g05050.1
Length = 826
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 173/342 (50%), Gaps = 47/342 (13%)
Query: 3 VLGSGYQAAFMVPTELLAIQXXXXXXXXXXXXDEVEFKPTVALLTGSTPLKQSRIIRKGI 62
V+ + QA + PT +LA Q +++ V LL+ + I
Sbjct: 318 VVSAKKQAMVLAPTIVLAKQHFDVISERFSVYPDIK----VGLLSRFQTKAEKEENLDKI 373
Query: 63 QTGEISMVIGTHSLIAESVEFLALRIAVVDEQHRFGVIQRGRFNSKLFCTSSISSVEDAV 122
+ G + +++GTHSL+ + V + L + VVDE+ RFGV Q+ + S F TS
Sbjct: 374 KNGSLDIIVGTHSLLGDRVTYNNLGLLVVDEEQRFGVKQKEKIAS--FKTSV-------- 423
Query: 123 TDRPSRNDAYMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVQTYTIEGNDK 182
VL +SATPIPRTL LAL G + ++ PP R+P++T+ ++
Sbjct: 424 -------------DVLTLSATPIPRTLYLALTGFRDASLMSTPPPERVPIKTHLSSFSE- 469
Query: 183 GFEDVYKMMMNELEDGGKVYLVYPIIELSEQLPQLRAASADFEAMSNRFHGYNCGLLHGK 242
+ V + EL+ GG+V+ V LP+++ ++ F + HGK
Sbjct: 470 --DKVVSAIKYELDRGGQVFYV---------LPRIKGLDEVMTFLAESFPNVEIAIAHGK 518
Query: 243 MKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMMVVLNSERFGIAQLHQLRGRVG 302
+ S + E+T++KF GE+ IL+ T ++E G+D+ +A+ +++ + ++FG+AQL+QLRGRVG
Sbjct: 519 LYSKQLEDTMEKFALGEIKILICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGRVG 578
Query: 303 RGTRQSKCILVASTAS-----SLNRLKVLEQSSD---GFHLA 336
R +++ L S +L RL +E+ + GF LA
Sbjct: 579 RADKEAHAYLFYPDKSLLSDQALERLAAIEECRELGQGFQLA 620
>Glyma19g28140.1
Length = 465
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 152/284 (53%), Gaps = 45/284 (15%)
Query: 62 IQTGEISMVIGTHSLIAESVEFLALRIAVVDEQHRFGVIQRGRFNSKLFCTSSISSVEDA 121
I+ G + +++GTHSL+ + V + L + VVDE+ RFGV Q+ + S F TS
Sbjct: 13 IKNGTLDIIVGTHSLLGDRVTYNNLGLLVVDEEQRFGVKQKEKIAS--FKTSV------- 63
Query: 122 VTDRPSRNDAYMAPHVLAMSATPIPRTLALALYGDMSLTQITDLPPGRIPVQTYTIE-GN 180
VL +SATPIPRTL LAL G + ++ PP R+P++T+ G
Sbjct: 64 --------------DVLTLSATPIPRTLYLALTGFRDASLMSTPPPERVPIKTHLSSFGE 109
Query: 181 DKGFEDVYKMMMNELEDGGKVYLVYPIIELSEQLPQLRAASADFEAMSNRFHGYNCGLLH 240
DK V + EL+ GG+V+ V LP+++ + F + H
Sbjct: 110 DK----VVSAIKYELDRGGQVFYV---------LPRIKGLDGVMAFLVESFPNVEIAIAH 156
Query: 241 GKMKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMMVVLNSERFGIAQLHQLRGR 300
GK+ S + E+T++KF GE+ IL+ T ++E G+D+ +A+ +++ + ++FG+AQL+QLRGR
Sbjct: 157 GKLYSKQLEDTMEKFALGEIKILICTNIVESGLDIQNANTIIIQDVQQFGLAQLYQLRGR 216
Query: 301 VGRGTRQSKCILVAS-----TASSLNRLKVLEQSSD---GFHLA 336
VGR +++ L + +L RL +E+ + GF LA
Sbjct: 217 VGRADKEAHAYLFYPDKGLLSDQALERLAAIEECRELGQGFQLA 260
>Glyma08g20070.1
Length = 1117
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 28/168 (16%)
Query: 182 KGFEDVYKMM-MNELEDGGKVYLVYPIIELSEQLPQLRAASADFEAMSNRFH--GYNCGL 238
K ED+ K + +N ++ G +Y + + D E ++ + G+ C
Sbjct: 586 KCLEDIDKFIRVNHFDECGIIYCL---------------SRMDCEKVAEKLQECGHKCAF 630
Query: 239 LHGKMKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMMVVLNSERFGIAQLHQLR 298
HG M ++ K++ E++I+ AT +G++ PD V+ +S I HQ
Sbjct: 631 YHGSMDPAQRASVQKQWSKDEINIICATVAFGMGINKPDV-RFVIHHSLPKSIEGYHQEC 689
Query: 299 GRVGRGTRQSKCILVASTASSLNRLK------VLEQSS--DGFHLANM 338
GR GR ++S CIL + + + R+K +EQSS G++ +NM
Sbjct: 690 GRAGRDGQRSSCILYYNYSDYI-RVKHMLSQGAIEQSSMTSGYNRSNM 736
>Glyma02g45030.1
Length = 595
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 236 CGLLHGKMKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMMVVL----NSERFGI 291
C LHG + ++E+TL FR G ++L+AT V G+D+P+ +++ NSE F
Sbjct: 359 CEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIF-- 416
Query: 292 AQLHQLRGRVGRGTRQSKCILV 313
+H+ GR GR ++ ILV
Sbjct: 417 --VHR-SGRTGRAGKKGTAILV 435
>Glyma14g03760.1
Length = 610
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 236 CGLLHGKMKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMMVVL----NSERFGI 291
C LHG + ++E+TL FR G ++L+AT V G+D+P+ +++ NSE F
Sbjct: 354 CEALHGDISQAQREKTLAGFRNGHFNVLVATDVASRGLDIPNVDLVIHYDLPNNSEIF-- 411
Query: 292 AQLHQLRGRVGRGTRQSKCILV 313
+H+ GR GR ++ ILV
Sbjct: 412 --VHR-SGRTGRAGKKGTAILV 430
>Glyma07g39910.1
Length = 496
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 221 SADFEAMSNRFHGYNCGLLHGKMKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASM 280
+AD A S GY LHG +++E +L+ FRT ++L+AT V G+D+PD +
Sbjct: 351 NADHVAKSLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAH 410
Query: 281 MVVLNSERFGIAQLHQLR-GRVGRGTRQSKCILVASTASSLNRLKVLEQSSDGFH 334
V+N + G +++ R GR GR + VA+T +L Q SD F+
Sbjct: 411 --VINYDMPGNIEMYTHRIGRTGRAGKTG----VATTFLTL-------QDSDVFY 452
>Glyma08g41510.1
Length = 635
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 236 CGLLHGKMKSDEKEETLKKFRTGEMHILLATQVIEIGVDVPDASMMVVLN----SERFGI 291
C LHG + ++E+TL FR ++L+AT V G+D+P+ +++ + SE F
Sbjct: 389 CEALHGDISQTQREKTLAGFRNNNFNVLVATDVASRGLDIPNVDLVIHYDLPNSSEIF-- 446
Query: 292 AQLHQLRGRVGRGTRQSKCILVASTASS 319
+H+ GR GR ++ ILV + S
Sbjct: 447 --VHR-SGRTGRAGKKGSAILVYTQGQS 471