Miyakogusa Predicted Gene

Lj0g3v0083439.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0083439.2 tr|A8J3F4|A8J3F4_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14911,43.97,5e-18,DUF1395,Protein of unknown function
DUF1395,CUFF.4369.2
         (181 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g33340.1                                                       344   3e-95
Glyma03g03730.1                                                       241   3e-64

>Glyma01g33340.1 
          Length = 270

 Score =  344 bits (883), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 164/181 (90%), Positives = 170/181 (93%)

Query: 1   MSLHVPYQMPDKMAISNLETSRCLFPEFSGQVSGSFEALKLDEEPAALPKEKKGRGAPPM 60
           MSLHVPYQM DK+ +S+LETSRCLFPEFSGQ SGSFEALKL+EEPAA+PKEKKGRG PP 
Sbjct: 90  MSLHVPYQMADKVTVSHLETSRCLFPEFSGQDSGSFEALKLEEEPAAVPKEKKGRGPPPT 149

Query: 61  WYVTGSELDSLSSYMRGRLTLEKVNAAITDMASYAEANAQLITAPKKKLAENLWEKALEI 120
           WYVT SELDSLSSYMRGRLTLEKVNAAI DM SYAEANAQLI APKKKLAENLWEKALEI
Sbjct: 150 WYVTRSELDSLSSYMRGRLTLEKVNAAINDMVSYAEANAQLIVAPKKKLAENLWEKALEI 209

Query: 121 RDIAGMEGIKGKHFFLEVDIKGPSLKLDNTGKAILTVLRHLGRINETRVGHHRVIILQKP 180
           RDIA MEGIKGKHFFLE DIKGPSLKLDNTGKAILTVLRHLGRINETRVGH+RVIILQKP
Sbjct: 210 RDIATMEGIKGKHFFLEADIKGPSLKLDNTGKAILTVLRHLGRINETRVGHNRVIILQKP 269

Query: 181 H 181
           H
Sbjct: 270 H 270


>Glyma03g03730.1 
          Length = 241

 Score =  241 bits (615), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 122/158 (77%), Positives = 132/158 (83%), Gaps = 5/158 (3%)

Query: 1   MSLHVPYQMPDKMAISNLETSR---CLFPEFSGQVSGSFEALKLDEEPAALPKEKKGRGA 57
           MSLHVPYQM DK+ +S+LET      L  +     SGSFEAL+LDEEPAA+PKE+KGRG+
Sbjct: 85  MSLHVPYQMADKVTLSHLETISEISSLLEQIPNCNSGSFEALRLDEEPAAVPKEEKGRGS 144

Query: 58  PPMWYVTGSELDSLSSYMRGRLTLEKVNAAITDMASYAEANAQLITAPKKKLAENLWEKA 117
           PP W+VTG+ELDSL  YMRGRLTLEKVNAAI DM SYAEANA LI  PKKKLAENLWEKA
Sbjct: 145 PPTWHVTGTELDSL--YMRGRLTLEKVNAAINDMVSYAEANALLIVVPKKKLAENLWEKA 202

Query: 118 LEIRDIAGMEGIKGKHFFLEVDIKGPSLKLDNTGKAIL 155
           LEIRDIA MEGIKGKH FLE DIKGPSLKLDNTGKAIL
Sbjct: 203 LEIRDIASMEGIKGKHSFLEADIKGPSLKLDNTGKAIL 240