Miyakogusa Predicted Gene
- Lj0g3v0082919.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0082919.1 Non Chatacterized Hit- tr|Q2PEP4|Q2PEP4_TRIPR
Putative uncharacterized protein (Fragment)
OS=Trifoli,79.48,0,Nucleotidyltransferase,NULL; PAP/OAS1
substrate-binding domain,NULL; seg,NULL;
TOPOISOMERASE-RELATED,CUFF.4351.1
(536 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g35290.1 717 0.0
Glyma13g35290.2 571 e-163
Glyma03g03890.2 84 3e-16
Glyma03g03890.1 84 3e-16
Glyma01g33160.1 68 2e-11
Glyma03g02290.1 66 1e-10
Glyma07g09020.1 65 2e-10
Glyma18g03900.1 58 3e-08
Glyma11g34420.1 57 5e-08
>Glyma13g35290.1
Length = 527
Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/474 (75%), Positives = 399/474 (84%), Gaps = 8/474 (1%)
Query: 1 MGEEQELPPIPETFLYETLPPLSSSTAAVDKSPPSDHHEPLSVFRSEISLSTVHCASPDS 60
M EEQEL IPET +Y+T+ PL+ S AVD SP SDH EP++VFR+EISL T ASP S
Sbjct: 1 MEEEQELK-IPETIIYDTIGPLALS--AVDDSPLSDHLEPIAVFRNEISLETPQRASPAS 57
Query: 61 AAPDFFSLDVAGEDSPGRDPLPEPVTLS-EPKTPALAPKPTLESNWFRGDCKFRSPMLQL 119
AA DFFSLDVA D+ RDP PE + + EP TPA AP+P LES WF G+CKF+SPMLQL
Sbjct: 58 AAVDFFSLDVAA-DASARDPFPELLAAAPEPMTPAPAPEPKLESGWFHGNCKFKSPMLQL 116
Query: 120 HKEIVDFCEFLSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVF---GSFRTGLYLPTSD 176
HKEIVDFC FLSPT EEKAARD+AI SV V+KHIWPHCQ ++ G LYLPTSD
Sbjct: 117 HKEIVDFCAFLSPTAEEKAARDLAIESVFGVVKHIWPHCQSFMWRCSGLSGQWLYLPTSD 176
Query: 177 IDVVILKAGLPNPQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDISFD 236
+DVVILK+GL NPQ+GLNAIS++LSQRG+AKKIQVIGKARVPIIKFVEKRSG+AFDISFD
Sbjct: 177 VDVVILKSGLQNPQIGLNAISKALSQRGMAKKIQVIGKARVPIIKFVEKRSGIAFDISFD 236
Query: 237 IDNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYXXXXXXXXXXRN 296
IDNGPKAAEYIQEAV KWPPLRPLCLILKVFLQQRELNEVYSGGIGSY RN
Sbjct: 237 IDNGPKAAEYIQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRN 296
Query: 297 LRQSQVSAEHNLGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFRKSSKGFANKGRPFLIG 356
LR SQ SAEHNLG+LLVHFFDFYGRKLNT+DVGVSCNG GTFF KSSKGF N+GRP LI
Sbjct: 297 LRLSQASAEHNLGVLLVHFFDFYGRKLNTSDVGVSCNGTGTFFVKSSKGFLNRGRPSLIA 356
Query: 357 IEDPQAPENDVGKNSYNYFQIRSAFAMAFSTLTDPKIILSLGPKRSILGTIIRPDPNLIE 416
IEDPQAPEND+GKNS+NYFQ+RSAF+MA LTD KII SLGP RSILGTIIRPDP L+E
Sbjct: 357 IEDPQAPENDIGKNSFNYFQVRSAFSMALKNLTDAKIITSLGPNRSILGTIIRPDPVLLE 416
Query: 417 RKGGLNGEVTFNSLLPGAGEPIQQKFGEQDMLCNWQLDDEEELLPRGVDTSAEP 470
RKGGLNG+VTF+ LLPGAGEP+QQ++G++DMLCNWQLD EEE LPRGV+TSAEP
Sbjct: 417 RKGGLNGDVTFDKLLPGAGEPLQQQYGDEDMLCNWQLDYEEEPLPRGVNTSAEP 470
>Glyma13g35290.2
Length = 384
Score = 571 bits (1471), Expect = e-163, Method: Compositional matrix adjust.
Identities = 290/388 (74%), Positives = 319/388 (82%), Gaps = 8/388 (2%)
Query: 1 MGEEQELPPIPETFLYETLPPLSSSTAAVDKSPPSDHHEPLSVFRSEISLSTVHCASPDS 60
M EEQEL IPET +Y+T+ PL+ S AVD SP SDH EP++VFR+EISL T ASP S
Sbjct: 1 MEEEQELK-IPETIIYDTIGPLALS--AVDDSPLSDHLEPIAVFRNEISLETPQRASPAS 57
Query: 61 AAPDFFSLDVAGEDSPGRDPLPEPVTLS-EPKTPALAPKPTLESNWFRGDCKFRSPMLQL 119
AA DFFSLDVA D+ RDP PE + + EP TPA AP+P LES WF G+CKF+SPMLQL
Sbjct: 58 AAVDFFSLDVAA-DASARDPFPELLAAAPEPMTPAPAPEPKLESGWFHGNCKFKSPMLQL 116
Query: 120 HKEIVDFCEFLSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVF---GSFRTGLYLPTSD 176
HKEIVDFC FLSPT EEKAARD+AI SV V+KHIWPHCQ ++ G LYLPTSD
Sbjct: 117 HKEIVDFCAFLSPTAEEKAARDLAIESVFGVVKHIWPHCQSFMWRCSGLSGQWLYLPTSD 176
Query: 177 IDVVILKAGLPNPQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDISFD 236
+DVVILK+GL NPQ+GLNAIS++LSQRG+AKKIQVIGKARVPIIKFVEKRSG+AFDISFD
Sbjct: 177 VDVVILKSGLQNPQIGLNAISKALSQRGMAKKIQVIGKARVPIIKFVEKRSGIAFDISFD 236
Query: 237 IDNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYXXXXXXXXXXRN 296
IDNGPKAAEYIQEAV KWPPLRPLCLILKVFLQQRELNEVYSGGIGSY RN
Sbjct: 237 IDNGPKAAEYIQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRN 296
Query: 297 LRQSQVSAEHNLGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFRKSSKGFANKGRPFLIG 356
LR SQ SAEHNLG+LLVHFFDFYGRKLNT+DVGVSCNG GTFF KSSKGF N+GRP LI
Sbjct: 297 LRLSQASAEHNLGVLLVHFFDFYGRKLNTSDVGVSCNGTGTFFVKSSKGFLNRGRPSLIA 356
Query: 357 IEDPQAPENDVGKNSYNYFQIRSAFAMA 384
IEDPQAPEND+GKNS+NYFQ RS A A
Sbjct: 357 IEDPQAPENDIGKNSFNYFQTRSCLAGA 384
>Glyma03g03890.2
Length = 742
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 225 KRSGVAFDISFDI--DNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIG 282
K V DISF G + E ++E A++P PL L+LK FL R L++ YSGG+
Sbjct: 550 KSKSVRLDISFKSPSHTGLQTTEMVKELTAQFPAATPLALVLKQFLADRSLDQSYSGGLS 609
Query: 283 SYXXXXXXXXXXRNLRQSQVSAEHNLGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFRKS 342
SY ++ N G LL+ F F+G + + +S G G + ++
Sbjct: 610 SYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGTGLYIKRE 669
Query: 343 SKGFANKGRPFLIGIEDPQAPENDVGKNSYNYFQIRSAFAMAFSTLTD 390
+ I I+DP P N+VG+N + Q AF+ A+S L +
Sbjct: 670 RGCSIDP-----IHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLEN 712
>Glyma03g03890.1
Length = 742
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 7/168 (4%)
Query: 225 KRSGVAFDISFDI--DNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIG 282
K V DISF G + E ++E A++P PL L+LK FL R L++ YSGG+
Sbjct: 550 KSKSVRLDISFKSPSHTGLQTTEMVKELTAQFPAATPLALVLKQFLADRSLDQSYSGGLS 609
Query: 283 SYXXXXXXXXXXRNLRQSQVSAEHNLGLLLVHFFDFYGRKLNTADVGVSCNGAGTFFRKS 342
SY ++ N G LL+ F F+G + + +S G G + ++
Sbjct: 610 SYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGTGLYIKRE 669
Query: 343 SKGFANKGRPFLIGIEDPQAPENDVGKNSYNYFQIRSAFAMAFSTLTD 390
+ I I+DP P N+VG+N + Q AF+ A+S L +
Sbjct: 670 RGCSIDP-----IHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYSVLEN 712
>Glyma01g33160.1
Length = 213
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 141 DMAIASVSDVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVIL-------KAGLPNPQMGL 193
+ A+ V+ ++ +WP + +FGS TG+ LPTSD+D+V+ +AG+ + G+
Sbjct: 8 NWAVKRVTRFLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVCLPPEPIKEAGILEGRNGI 67
Query: 194 NAISRSLSQRGIAKKIQVIGKARVPIIKF-VEKRSGVAFDISFD--IDNGPKAAEYIQEA 250
+ + +++ + ++ +KF K V DI+F G + E ++
Sbjct: 68 KETCLQIPIIMLVVELEDLALSKRSQMKFDALKSKSVRLDINFKSPSHTGLQTTEMVKGL 127
Query: 251 VAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY 284
++P PL L+LK FL R L++ SGG+ SY
Sbjct: 128 TEQFPAATPLALVLKQFLADRSLDQSDSGGLSSY 161
>Glyma03g02290.1
Length = 731
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 112 FRSPMLQLHKEIVDFCEFLSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVFGSFRTGLY 171
F P L ++ ++ P EEK + +A + ++ WP + ++GS
Sbjct: 409 FNVPFLAIYGSLI-------PPEEEKLKQKQLVAILEKLVSKEWPTSNLYLYGSCANSFG 461
Query: 172 LPTSDIDVVILKAGLPNPQMGLNAISRSLS---QRGIAKKIQVIGKARVPIIKFVEKRSG 228
+ SDIDV + + M + I L+ Q + +Q + +ARVPI+K ++ +G
Sbjct: 462 VSKSDIDVCL---AIEEADMEKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTG 518
Query: 229 VAFDISFDIDNGPKAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY 284
++ DI + + +++ P LR L I+K + + R +NE Y G + SY
Sbjct: 519 ISCDICINNLLAVVNTKLLRDYAHIDPRLRQLAFIIKHWAKSRRVNETYHGTLSSY 574
>Glyma07g09020.1
Length = 460
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 6/158 (3%)
Query: 130 LSPTPEEKAARDMAIASVSDVIKHIWPHCQVEVFGSFRTGLYLPTSDIDVVILKAGLPNP 189
L P EEK + +A + ++ WP ++ ++GS + SDIDV + +
Sbjct: 149 LIPPEEEKLKQKKLVALLEKLVSKEWPTAKLYLYGSCANSFGVSKSDIDVCL---AIEEA 205
Query: 190 QMGLNAISRSLS---QRGIAKKIQVIGKARVPIIKFVEKRSGVAFDISFDIDNGPKAAEY 246
M + I L+ Q + +Q + +ARVPI+K ++ +G++ DI + +
Sbjct: 206 DMEKSKIIMKLADILQSDNLQNVQALTRARVPIVKLMDPVTGISCDICINNLLAVVNTKL 265
Query: 247 IQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY 284
+++ P LR L I+K + + R +NE Y G + SY
Sbjct: 266 LRDYAHIDPRLRQLAFIIKHWAKSRRVNETYHGTLSSY 303
>Glyma18g03900.1
Length = 260
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 125 DFCEFLSPTPEEKAARDMAIASVSDVIKHI--WPHCQVEVFGSFRTGLYLPTSDIDVVI- 181
D ++P E+ R I + +++ + VE FGSF + L+ D+D+ I
Sbjct: 13 DILRVVTPVQEDWEIRFAIINDLRSIVESVESLRGATVEPFGSFVSNLFTRWGDLDISIE 72
Query: 182 -------LKAGLPNPQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDIS 234
AG Q L + ++L +G +Q I ARVPI+KF R GV+ DIS
Sbjct: 73 LSNGLHISSAGKKQKQTFLGDVLKALRMKGGGSNLQFISNARVPILKFKSYRQGVSCDIS 132
Query: 235 FDIDNGPKAAEYIQEAVAKWPP-----LRPLCLILKVFLQQRELNEVYSGGIGSY 284
I+N P ++ + W R + L++K + + ++N +G SY
Sbjct: 133 --INNLPGQ---MKSKILLWINKIDGRFRHMVLLVKEWAKAHKINNSKAGTFNSY 182
>Glyma11g34420.1
Length = 455
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 20/175 (11%)
Query: 125 DFCEFLSPTPEEKAARDMAIASVSDVIKHI--WPHCQVEVFGSFRTGLYLPTSDIDVVI- 181
D ++P E+ R I +++ + VE +GSF + L+ D+D+ I
Sbjct: 13 DILRVVTPLQEDWEIRFAIINDFRSIVESVESLRGATVEPYGSFVSNLFTRWGDLDISIE 72
Query: 182 -------LKAGLPNPQMGLNAISRSLSQRGIAKKIQVIGKARVPIIKFVEKRSGVAFDIS 234
AG Q L + ++L +G +Q I ARVPI+KF R GV+ DIS
Sbjct: 73 LSNGLHISSAGKKQKQTLLGEVLKALRMKGGGSNLQFISNARVPILKFKSYRQGVSCDIS 132
Query: 235 FDIDNGP-----KAAEYIQEAVAKWPPLRPLCLILKVFLQQRELNEVYSGGIGSY 284
I+N P K +I + + R + L++K + + ++N +G SY
Sbjct: 133 --INNLPGQMKSKILLWINKIDGR---FRHMVLLVKEWAKAHKINNSKAGTFNSY 182