Miyakogusa Predicted Gene

Lj0g3v0082389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0082389.1 Non Chatacterized Hit- tr|Q00YQ0|Q00YQ0_OSTTA
Uncharacterized protein (Fragment) OS=Ostreococcus tau,32.02,6e-18,no
description,Ribosomal protein L25, beta domain; Ribosomal protein
L25-like,Ribosomal protein L25/,CUFF.4296.1
         (195 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g09970.1                                                       334   4e-92
Glyma17g20470.1                                                       176   2e-44
Glyma19g29410.1                                                       141   5e-34
Glyma16g04090.1                                                       141   5e-34
Glyma19g29410.2                                                       130   6e-31
Glyma03g09170.1                                                        51   6e-07
Glyma10g09820.1                                                        50   1e-06

>Glyma05g09970.1 
          Length = 246

 Score =  334 bits (856), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 160/193 (82%), Positives = 176/193 (91%)

Query: 2   QGRIPAVVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAG 61
           QGRIP VVFLQ+LL K+   RS +KKHLLTVEKKQIKAIL+S    FFCSTRFPLQIRAG
Sbjct: 53  QGRIPCVVFLQNLLEKNPDARSESKKHLLTVEKKQIKAILDSADAPFFCSTRFPLQIRAG 112

Query: 62  SGSSHLVESGTVLPVKIHMDQESGQILNLVFVWAEEGMNLKVDVPVVFKGEDVCPGLQKG 121
           SGSSHL+ESGTVLP+KIH D+ESG+ILNLVFVWAE+GM LKVDVPVVF+GED CPG+QKG
Sbjct: 113 SGSSHLLESGTVLPIKIHRDEESGKILNLVFVWAEDGMKLKVDVPVVFEGEDACPGVQKG 172

Query: 122 GFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICK 181
           G LNKIR SLKFLCPSEHIPSKI VDVSNLDIEDRIFMRDIEVHPSLKLLSKNE+MPICK
Sbjct: 173 GILNKIRPSLKFLCPSEHIPSKIVVDVSNLDIEDRIFMRDIEVHPSLKLLSKNESMPICK 232

Query: 182 VVPTSLGNQAPVD 194
           +VPTSLGN+ P++
Sbjct: 233 IVPTSLGNKEPIE 245


>Glyma17g20470.1 
          Length = 97

 Score =  176 bits (445), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/96 (85%), Positives = 89/96 (92%)

Query: 99  MNLKVDVPVVFKGEDVCPGLQKGGFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIF 158
           M LKVDVPVVFKGED CPG+QKGG LNKIR SL+FLCPSEHIPS I VDVSNLDIEDRIF
Sbjct: 1   MKLKVDVPVVFKGEDACPGVQKGGILNKIRPSLRFLCPSEHIPSNIAVDVSNLDIEDRIF 60

Query: 159 MRDIEVHPSLKLLSKNENMPICKVVPTSLGNQAPVD 194
           MRDIEVHPSLKLLSKNENMP+CK+VPTSLGN+ P++
Sbjct: 61  MRDIEVHPSLKLLSKNENMPVCKIVPTSLGNKEPIE 96


>Glyma19g29410.1 
          Length = 257

 Score =  141 bits (355), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/175 (43%), Positives = 112/175 (64%), Gaps = 8/175 (4%)

Query: 3   GRIPAVVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAGS 62
           GR+P++VF Q+        +    K L++V   QI+ ++N +  SFF S  F LQ+RA  
Sbjct: 72  GRLPSIVFEQE------DGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFHLQVRAHF 125

Query: 63  GS-SHLVESGTVLPVKIHMDQESGQILNLVFVWAEEGMNLKVDVPVVFKGEDVCPGLQKG 121
            S    VE+  VLP  IH+   +   LN+ F+ A     LKVDVP+VF+GEDV PGL+KG
Sbjct: 126 DSEDDFVETVRVLPRAIHLKAGTDAPLNVTFIRAPSNALLKVDVPLVFRGEDVSPGLKKG 185

Query: 122 GFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLL-SKNE 175
             LN I+ ++K+LCP++ IP  I+VD+S LD+  ++ M D++VHP+LKLL S++E
Sbjct: 186 ASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSRDE 240


>Glyma16g04090.1 
          Length = 257

 Score =  141 bits (355), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 112/174 (64%), Gaps = 7/174 (4%)

Query: 3   GRIPAVVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAGS 62
           GR+P++VF Q+        +    K L++V   QI+ ++N +  SFF S  F L++R+G 
Sbjct: 72  GRLPSIVFEQE------DGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFLLEVRSGF 125

Query: 63  GSSH-LVESGTVLPVKIHMDQESGQILNLVFVWAEEGMNLKVDVPVVFKGEDVCPGLQKG 121
            S + +VE+  VLP  IH+   +   LN+ F+ A     LKVDVP+VF+GEDV PGL+KG
Sbjct: 126 DSENDVVETVRVLPRAIHLKAGTDAPLNVTFIRAPSDALLKVDVPLVFRGEDVSPGLKKG 185

Query: 122 GFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLLSKNE 175
             LN I+ ++K+LCP++ IP  I+VD+S LD+  ++ M D++VHP+LKLL   +
Sbjct: 186 ASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQPRD 239


>Glyma19g29410.2 
          Length = 250

 Score =  130 bits (328), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 73/175 (41%), Positives = 109/175 (62%), Gaps = 15/175 (8%)

Query: 3   GRIPAVVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAGS 62
           GR+P++VF Q+        +    K L++V   QI+ ++N +  SFF S  F LQ+RA  
Sbjct: 72  GRLPSIVFEQE------DGQHGGNKRLISVRTDQIRKLVNHLGRSFFLSRLFHLQVRAHF 125

Query: 63  GS-SHLVESGTVLPVKIHMDQESGQILNLVFVWAEEGMNLKVDVPVVFKGEDVCPGLQKG 121
            S    VE+       IH+   +   LN+ F+ A     LKVDVP+VF+GEDV PGL+KG
Sbjct: 126 DSEDDFVET-------IHLKAGTDAPLNVTFIRAPSNALLKVDVPLVFRGEDVSPGLKKG 178

Query: 122 GFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLL-SKNE 175
             LN I+ ++K+LCP++ IP  I+VD+S LD+  ++ M D++VHP+LKLL S++E
Sbjct: 179 ASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSRDE 233


>Glyma03g09170.1 
          Length = 85

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 6/90 (6%)

Query: 24  AAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAGSGSSHLVESGTVLPVKIHMDQE 83
              K L++    QI+ ++N +  SFF S  F LQ+      +H  +S     V IH+   
Sbjct: 2   GGNKRLISGCTDQIRKLVNHLGRSFFISRLFHLQV-----CTHF-DSEDDFVVTIHLKAG 55

Query: 84  SGQILNLVFVWAEEGMNLKVDVPVVFKGED 113
           +   LN+ F+ A     LKVDVP+VF+GED
Sbjct: 56  TDAPLNVTFIRAPSNALLKVDVPLVFRGED 85


>Glyma10g09820.1 
          Length = 95

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 27  KHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAGSGS-SHLVESGTVLPVKIHMDQESG 85
           K L+ V   QI+ ++N +  SFF S  F LQ+ A   S +  V +  VLP  IH+   + 
Sbjct: 14  KRLIFVCTDQIRKLVNHLGRSFFLSRLFHLQVHAHFDSEADFVLTVRVLPHAIHLKAGTD 73

Query: 86  QILNLVFVWAEEGMNLKVDVPV 107
            +LN+ F+ A     LKVDVP+
Sbjct: 74  ALLNMTFIRAPSNALLKVDVPL 95