Miyakogusa Predicted Gene

Lj0g3v0081449.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081449.1 tr|G7LHQ3|G7LHQ3_MEDTR Ubiquitin
carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_8g067060
,52.63,0.001, ,CUFF.4222.1
         (39 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g02240.1                                                        49   9e-07
Glyma09g33740.1                                                        48   3e-06

>Glyma01g02240.1 
          Length = 692

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/41 (56%), Positives = 26/41 (63%), Gaps = 2/41 (4%)

Query: 1   MGSILQCLTHTINLFQGLRSYTH--DCQDDAGDFCVFCALR 39
           + +ILQC THT+ L QGLRS TH   C      FCV CALR
Sbjct: 126 LNAILQCFTHTVPLVQGLRSSTHPIPCSGHKDGFCVICALR 166


>Glyma09g33740.1 
          Length = 398

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/41 (56%), Positives = 26/41 (63%), Gaps = 2/41 (4%)

Query: 1  MGSILQCLTHTINLFQGLRSYTH--DCQDDAGDFCVFCALR 39
          + +ILQC THT+ L QGLRS TH   C      FCV CALR
Sbjct: 13 LNAILQCFTHTVPLVQGLRSSTHLIPCSGHKDGFCVICALR 53