Miyakogusa Predicted Gene

Lj0g3v0081379.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0081379.1 tr|B9PE70|B9PE70_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_586182 PE=4
SV=1,70,2e-18,seg,NULL,CUFF.4217.1
         (72 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g08940.1                                                       104   2e-23
Glyma10g36850.1                                                       101   1e-22
Glyma20g30760.1                                                        94   3e-20
Glyma09g38830.1                                                        47   5e-06

>Glyma02g08940.1 
          Length = 654

 Score =  104 bits (259), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 47/72 (65%), Positives = 55/72 (76%)

Query: 1   MLQPEVKSRAMEIAKLIENEDGVTAAVDAFHRHXXXXXXXXXXXXMEENYPDPFQWFFLH 60
           MLQPEVKSRAME+AKLIENEDGVTAAVD+FHRH            + +++ +P QWFFL 
Sbjct: 583 MLQPEVKSRAMEVAKLIENEDGVTAAVDSFHRHLPPELPLPIPSAVVDDHANPLQWFFLQ 642

Query: 61  LAKWCCLPCGGV 72
           LAK+C LPCGGV
Sbjct: 643 LAKFCTLPCGGV 654


>Glyma10g36850.1 
          Length = 580

 Score =  101 bits (252), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/72 (65%), Positives = 53/72 (73%)

Query: 1   MLQPEVKSRAMEIAKLIENEDGVTAAVDAFHRHXXXXXXXXXXXXMEENYPDPFQWFFLH 60
           MLQPEVKS AMEIAKLIENEDGV AAVDAFHRH            +EE++ +P QWFFL 
Sbjct: 509 MLQPEVKSLAMEIAKLIENEDGVAAAVDAFHRHLPDELPLPTPIPVEEDHLNPLQWFFLQ 568

Query: 61  LAKWCCLPCGGV 72
           L ++CC PCGGV
Sbjct: 569 LGRFCCAPCGGV 580


>Glyma20g30760.1 
          Length = 542

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/74 (63%), Positives = 52/74 (70%), Gaps = 3/74 (4%)

Query: 1   MLQPEVKSRAMEIAKLIENEDGVTAAVDAFHRHXXXXXXXXXXXXM---EENYPDPFQWF 57
           MLQPEVKSRAMEIAKLIENEDGV AAVDAFHRH                EE++ +P QWF
Sbjct: 469 MLQPEVKSRAMEIAKLIENEDGVAAAVDAFHRHLPDELPLPTPTPTPVEEEDHLNPLQWF 528

Query: 58  FLHLAKWCCLPCGG 71
           FL L ++CC PCGG
Sbjct: 529 FLRLGRFCCAPCGG 542


>Glyma09g38830.1 
          Length = 523

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/33 (60%), Positives = 27/33 (81%)

Query: 1   MLQPEVKSRAMEIAKLIENEDGVTAAVDAFHRH 33
           ML+PEVK RA+E+A  ++NEDGV  AV AF++H
Sbjct: 447 MLKPEVKKRAVELANAMKNEDGVLGAVKAFYKH 479