Miyakogusa Predicted Gene

Lj0g3v0080979.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0080979.2 Non Chatacterized Hit- tr|B9RSM2|B9RSM2_RICCO
Ubiquitin-protein ligase, putative OS=Ricinus
communis,34.08,7e-19,coiled-coil,NULL,CUFF.4175.2
         (205 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g06110.1                                                       168   4e-42
Glyma13g07530.1                                                       165   3e-41

>Glyma19g06110.1 
          Length = 636

 Score =  168 bits (425), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/176 (53%), Positives = 120/176 (68%), Gaps = 6/176 (3%)

Query: 1   MEEGEAETILRELVRKQNLRSGENTLAVEFQTRLLTLLRTASGHESPSLTTIDGNCSWLN 60
           +++GEA+ ILRELVRKQNLR G+NTL V+FQ R+LTL+ T SG+ESPSLTT +GN SWL 
Sbjct: 356 LKKGEADAILRELVRKQNLRRGQNTLVVQFQIRVLTLILTDSGNESPSLTTSNGNNSWLK 415

Query: 61  ALGDLTLQSPLVLKDFPVEMLNEGLSGYCNLSLCDKLRLLTFICDEVLNSEKVRSHIEKE 120
            L DL  +S  +LKDFP++ L EG+SGY NL L  KL LL F+CDE L ++K+RS IE +
Sbjct: 416 PLEDLITKSNHILKDFPLDWLQEGVSGYSNLDLSKKLTLLNFLCDEALATDKLRSCIEDK 475

Query: 121 NLNIEKQRKEAKALFAVAKEK------NLLEETAKTVHSNGDPGSSTEQDAVVLKL 170
           N    ++ KEAK   A AKEK       L  ET K V SN  P    + DA++ K+
Sbjct: 476 NSRHVEEVKEAKTRIAAAKEKEKGLRQKLQNETVKAVLSNATPLKMEKHDALLKKM 531


>Glyma13g07530.1 
          Length = 708

 Score =  165 bits (418), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/209 (49%), Positives = 132/209 (63%), Gaps = 9/209 (4%)

Query: 1   MEEGEAETILRELVRKQNLRSGENTLAVEFQTRLLTLLRTASGHESPSLTTIDGNCSWLN 60
           +++GEAE ILRELVRKQNLR G+NTL V+FQ R+LTL+ T SG+ESPSLTT +GN SWL 
Sbjct: 427 LKKGEAEAILRELVRKQNLRRGQNTLVVQFQIRVLTLILTDSGNESPSLTTSNGNNSWLK 486

Query: 61  ALGDLTLQSPLVLKDFPVEMLNEGLSGYCNLSLCDKLRLLTFICDEVLNSEKVRSHIEKE 120
            L DL   S  +LKDFP++ L EG+ GY NL L  KL LL F+CDE L ++K+RS IE +
Sbjct: 487 PLEDLIAGSDHILKDFPLDWLQEGVGGYYNLDLSKKLTLLNFLCDEALITDKLRSCIEDQ 546

Query: 121 NLNIEKQRKEAKALFAVAKEK------NLLEETAKTVHSNGDPGSSTEQDAVVLKLLKLT 174
           N    ++ KEAK   A AKEK       L  E  K V SN  P    + DA +LK++K  
Sbjct: 547 NSRHAEEVKEAKNKIAAAKEKEKGLRQKLQNEMVKAVLSNAAPLRMEKHDA-LLKMMKSE 605

Query: 175 VRCSRLRAGFLKGKFMMLRGISLSLWMVV 203
           V  ++  A  LK K  + +G   S  M +
Sbjct: 606 V--AQAHAVVLKLKGTIPKGKHSSDAMRI 632